Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR4727-201ENST00000622232 55 ntBASIC5.36□□□□□ -1.55
RTN4Q9NQC3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTN4Q9NQC3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTN4Q9NQC3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTN4Q9NQC3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.35□□□□□ -1.55
RTN4Q9NQC3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RTN4Q9NQC3 Y_RNA.99-201ENST00000363138 105 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 RNA5SP242-201ENST00000364171 118 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 MIR143-201ENST00000385300 106 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 SDHCP2-201ENST00000398565 501 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 SNORA36B-201ENST00000410438 131 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 RNU2-48P-201ENST00000410694 191 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 AL135786.1-201ENST00000415892 214 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 TRIAP1P1-201ENST00000427062 225 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.35□□□□□ -1.55
RTN4Q9NQC3 TPT1P12-201ENST00000448968 492 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 AP001486.1-201ENST00000463339 476 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.35□□□□□ -1.55
RTN4Q9NQC3 AC107934.2-201ENST00000518653 310 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 AC127455.1-201ENST00000565496 145 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 AC015912.2-201ENST00000571053 181 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 MIR3144-201ENST00000579460 79 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.35□□□□□ -1.55
RTN4Q9NQC3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.35□□□□□ -1.55
RTN4Q9NQC3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.34□□□□□ -1.55
RTN4Q9NQC3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RTN4Q9NQC3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RTN4Q9NQC3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RTN4Q9NQC3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RTN4Q9NQC3 U8.7-201ENST00000364940 136 ntBASIC5.34□□□□□ -1.55
RTN4Q9NQC3 MIR181A2-201ENST00000384863 110 ntBASIC5.34□□□□□ -1.55
RTN4Q9NQC3 CHEK2P5-201ENST00000423877 246 ntBASIC5.34□□□□□ -1.55
RTN4Q9NQC3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.34□□□□□ -1.55
RTN4Q9NQC3 RN7SL97P-201ENST00000486780 299 ntBASIC5.34□□□□□ -1.55
RTN4Q9NQC3 COX6B1P5-201ENST00000509843 249 ntBASIC5.34□□□□□ -1.55
RTN4Q9NQC3 MIR4438-201ENST00000585271 93 ntBASIC5.34□□□□□ -1.55
RTN4Q9NQC3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RTN4Q9NQC3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AL356292.1-201ENST00000283110 373 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AC016909.1-201ENST00000415916 166 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 EDDM3CP-201ENST00000415977 425 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AC025750.2-201ENST00000442609 450 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AC117454.1-201ENST00000491120 168 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 BX510359.5-201ENST00000515651 304 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 RNU6-709P-201ENST00000517257 104 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AL160290.3-201ENST00000604869 165 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AL022401.1-201ENST00000619498 108 ntBASIC5.33□□□□□ -1.56
RTN4Q9NQC3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.33□□□□□ -1.56
RTN4Q9NQC3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4Q9NQC3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4Q9NQC3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RTN4Q9NQC3 Y_RNA.24-201ENST00000362508 103 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 SNORA26.7-201ENST00000391288 122 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 AL512604.1-201ENST00000404812 257 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 OR3A2-201ENST00000408891 1076 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 Z96811.1-201ENST00000445880 108 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 AC007225.2-201ENST00000562529 256 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 SNORA74C-1-201ENST00000580726 201 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
RTN4Q9NQC3 INTS6P1-201ENST00000504674 2530 ntBASIC5.32□□□□□ -1.56
RTN4Q9NQC3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4Q9NQC3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4Q9NQC3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 MFSD8-236ENST00000641509 4050 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RNA5SP124-201ENST00000362739 110 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RN7SKP160-201ENST00000363804 340 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RNA5SP125-201ENST00000364843 120 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 Y_RNA.412-201ENST00000384001 104 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RNY3P5-201ENST00000384127 102 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RNU6-376P-201ENST00000384731 106 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RNU6-578P-201ENST00000390980 103 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 Y_RNA.580-201ENST00000391004 95 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 CYCSP19-201ENST00000411715 316 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC092427.1-202ENST00000430569 476 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AL162725.1-201ENST00000435405 301 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 RN7SL244P-201ENST00000493405 297 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 MIR3133-201ENST00000583157 78 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC011447.4-201ENST00000587562 111 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 AC019206.1-201ENST00000621938 425 ntBASIC5.31□□□□□ -1.56
RTN4Q9NQC3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RTN4Q9NQC3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
RTN4Q9NQC3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.3□□□□□ -1.56
RTN4Q9NQC3 SNURFL-201ENST00000309296 343 ntBASIC5.3□□□□□ -1.56
RTN4Q9NQC3 SNORA51.1-201ENST00000363243 140 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms