Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSU72Q9NP77 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSU72Q9NP77 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC134026.1-201ENST00000623249 2239 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSU72Q9NP77 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 RNU6-1010P-201ENST00000362757 107 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 RNU6-1048P-201ENST00000364054 107 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 RNA5SP130-201ENST00000364431 114 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 AP002088.1-201ENST00000382740 395 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 SNORA1.3-201ENST00000384676 136 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 RNU6-19P-201ENST00000384718 107 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 MIR626-201ENST00000385032 94 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC004386.2-201ENST00000441858 148 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 SCARNA8-201ENST00000515924 131 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 Y_RNA.797-201ENST00000515977 94 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 RNU6-107P-201ENST00000516643 102 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 NDUFB9P3-201ENST00000521269 501 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 EIF4A1P12-201ENST00000551910 141 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC105137.2-201ENST00000569073 466 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 TCL6_2.1-201ENST00000615162 119 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC006133.1-201ENST00000617106 264 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC068205.3-201ENST00000636385 468 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SSU72Q9NP77 AC010329.5-201ENST00000623497 2174 ntBASIC3.66□□□□□ -1.82
SSU72Q9NP77 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.65□□□□□ -1.82
SSU72Q9NP77 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SSU72Q9NP77 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSU72Q9NP77 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SSU72Q9NP77 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSU72Q9NP77 AF127577.6-201ENST00000623352 2191 ntBASIC3.65□□□□□ -1.82
SSU72Q9NP77 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSU72Q9NP77 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SSU72Q9NP77 MIR30E-201ENST00000362104 92 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 RNU6-578P-201ENST00000390980 103 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 HSPE1P26-201ENST00000405341 275 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 MIR320B2-201ENST00000408479 138 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 RNU2-49P-201ENST00000410666 184 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 EBAG9P1-201ENST00000418955 543 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 CR769767.1-201ENST00000436337 346 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 RPS20P10-201ENST00000451209 253 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.65□□□□□ -1.83
SSU72Q9NP77 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 RNU2-58P-201ENST00000516403 183 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.65□□□□□ -1.83
SSU72Q9NP77 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.65□□□□□ -1.83
SSU72Q9NP77 MIR4744-201ENST00000581563 82 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 MIR5096-201ENST00000583713 70 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 RNU6-91P-201ENST00000607774 107 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AC069294.1-201ENST00000608397 350 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AC005562.2-201ENST00000618264 111 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AL445567.2-201ENST00000618935 498 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 AP000553.6-201ENST00000641242 118 ntBASIC3.65□□□□□ -1.83
SSU72Q9NP77 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.65□□□□□ -1.83
SSU72Q9NP77 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 Y_RNA.361-201ENST00000365515 120 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 SNORA72.4-201ENST00000384174 132 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 RNU6-417P-201ENST00000384712 107 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 AC245291.1-201ENST00000419501 328 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 AL159169.1-201ENST00000421119 127 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSU72Q9NP77 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.64□□□□□ -1.83
SSU72Q9NP77 AC010618.1-201ENST00000469924 477 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 AC107626.1-201ENST00000471084 183 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.64□□□□□ -1.83
SSU72Q9NP77 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 RNU6-453P-201ENST00000516819 85 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.64□□□□□ -1.83
SSU72Q9NP77 AC022616.8-201ENST00000533569 253 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.64□□□□□ -1.83
SSU72Q9NP77 MIR3684-201ENST00000579779 74 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 MIR4431-201ENST00000579990 94 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 SNORD11B-201ENST00000607707 90 ntBASIC3.64□□□□□ -1.83
SSU72Q9NP77 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSU72Q9NP77 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.64□□□□□ -1.83
SSU72Q9NP77 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSU72Q9NP77 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSU72Q9NP77 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSU72Q9NP77 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSU72Q9NP77 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSU72Q9NP77 SNORA18.2-201ENST00000383865 132 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.63□□□□□ -1.83
SSU72Q9NP77 RPS4XP2-201ENST00000458402 793 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 RN7SKP164-201ENST00000516138 266 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 MIR548X2-201ENST00000579776 100 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 MIR3138-201ENST00000585238 82 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms