Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC010099.3-201ENST00000423896 409 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC073910.1-201ENST00000445047 438 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 GAPDHP17-201ENST00000449858 1001 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC048334.1-201ENST00000477975 159 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AL353149.1-201ENST00000610667 244 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC106800.4-201ENST00000614905 153 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC007742.2-201ENST00000618226 398 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 ELL2P3-201ENST00000457883 1602 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-371P-201ENST00000364283 108 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 SNORD31B-201ENST00000364977 69 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-378P-201ENST00000384324 107 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AC114491.1-201ENST00000416095 246 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 RNU7-34P-201ENST00000459394 64 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AC011406.1-201ENST00000512440 370 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-276P-201ENST00000516114 96 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 RNA5SP255-201ENST00000516370 107 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-1003P-201ENST00000517099 105 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 APOOP3-201ENST00000536787 586 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 MIR548AC-201ENST00000585049 88 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AL158032.1-201ENST00000605401 106 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 AL158211.2-201ENST00000607282 395 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 U4.7-201ENST00000638126 106 ntBASIC0.42□□□□□ -2.34
KIAA1549Q9HCM3 snoU2-30.2-201ENST00000362805 70 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 U3.4-201ENST00000363352 213 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AL162395.1-201ENST00000457882 422 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 SNRPGP7-201ENST00000469016 106 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 RNU1-86P-201ENST00000516108 154 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 RNU1-107P-201ENST00000516617 154 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AC112187.2-201ENST00000604345 283 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AC008133.2-201ENST00000624540 351 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 MIR548B-201ENST00000385247 97 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-298P-201ENST00000390888 96 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 HIGD1AP15-201ENST00000416198 280 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 snoU109.3-201ENST00000459477 145 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 RAP1BP2-201ENST00000478270 544 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AC022447.4-201ENST00000504053 364 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 MTND3P25-201ENST00000509243 135 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 HSPE1P23-201ENST00000509838 286 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 SNORA31.2-201ENST00000516019 134 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 AC097372.5-201ENST00000623665 376 ntBASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
KIAA1549Q9HCM3 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 SNORD114-24-201ENST00000365029 72 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-61P-201ENST00000365528 109 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 MIR578-201ENST00000384828 96 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 MIR942-201ENST00000401111 86 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 MTCYBP2-201ENST00000407745 171 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AC063976.4-201ENST00000421971 163 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 CALM2P2-201ENST00000428512 440 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AL360271.2-201ENST00000447710 161 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 RNU7-14P-201ENST00000459331 62 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AC117522.1-201ENST00000509821 380 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AC116347.2-201ENST00000514912 523 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 RNA5SP168-201ENST00000516642 112 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AP002453.2-201ENST00000533503 320 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 MIR3664-201ENST00000579074 99 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AC008752.3-201ENST00000588113 712 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 AC110760.3-201ENST00000598794 467 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.4□□□□□ -2.35
KIAA1549Q9HCM3 Y_RNA.46-201ENST00000362695 102 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC002486.1-201ENST00000435098 391 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 MTCYBP39-201ENST00000437562 491 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNU6-496P-201ENST00000516145 99 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 ACA64.5-201ENST00000516207 127 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 RNA5SP330-201ENST00000517096 96 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 SNORA70.22-201ENST00000517160 124 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC136628.3-201ENST00000521868 290 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AP002360.4-201ENST00000606980 481 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 PART1_2.1-201ENST00000612397 250 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 SNORD3E-202ENST00000627253 216 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 MIR924-201ENST00000638017 53 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 AC092268.1-201ENST00000342691 405 ntBASIC0.39□□□□□ -2.35
KIAA1549Q9HCM3 MIR340-201ENST00000362125 95 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms