Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SNORA40.19-201ENST00000390846 128 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 SNORA75.4-201ENST00000391278 119 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 RNU6-174P-201ENST00000410406 106 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.41□□□□□ -2.02
BRF2Q9HAW0 AC079354.2-201ENST00000453523 154 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 RPL23AP75-201ENST00000491601 451 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.41□□□□□ -2.02
BRF2Q9HAW0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 MIR3200-201ENST00000580767 85 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 AL359757.2-201ENST00000624309 274 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
BRF2Q9HAW0 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
BRF2Q9HAW0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
BRF2Q9HAW0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
BRF2Q9HAW0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
BRF2Q9HAW0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 RNU6-743P-201ENST00000364151 106 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 Y_RNA.387-201ENST00000383918 102 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 RNU6-1297P-201ENST00000384415 104 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AL357139.1-201ENST00000407792 426 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 RNU4-14P-201ENST00000410858 122 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 SRIP3-201ENST00000413200 219 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 EDDM3CP-201ENST00000415977 425 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 COTL1P1-201ENST00000422309 375 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 USMG5P1-201ENST00000425964 177 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AF186996.7-201ENST00000492781 209 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AC090517.1-201ENST00000569307 266 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AC005899.2-201ENST00000584353 90 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AC078899.2-201ENST00000595282 212 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AL132765.2-201ENST00000610812 351 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 SCARNA4-201ENST00000629045 128 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 AL669831.3-213ENST00000636676 183 ntBASIC2.4□□□□□ -2.03
BRF2Q9HAW0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
BRF2Q9HAW0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 Y_RNA.259-201ENST00000364619 101 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 RNU5E-4P-201ENST00000364931 120 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 RNU6-867P-201ENST00000364956 107 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 Y_RNA.474-201ENST00000384341 102 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 Y_RNA.529-201ENST00000384586 119 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 MIR32-201ENST00000384965 70 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 MT-TD-201ENST00000387419 68 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 RNU2-52P-201ENST00000410680 190 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 RNU6-1304P-201ENST00000411374 106 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AL358453.1-201ENST00000422522 250 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AC011753.1-201ENST00000451001 220 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 FRG2DP-202ENST00000566967 323 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AC009127.3-201ENST00000570531 403 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 RPS3AP23-202ENST00000574601 686 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AL355375.2-201ENST00000574825 175 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 LARP7P3-201ENST00000579888 337 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 MIR7106-201ENST00000612419 65 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AC133104.2-201ENST00000615272 193 ntBASIC2.39□□□□□ -2.03
BRF2Q9HAW0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BRF2Q9HAW0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 RNU6-26P-201ENST00000383985 107 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 SNORA41-201ENST00000384675 132 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 RNU6-331P-201ENST00000384724 107 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 IFNA11P-201ENST00000446352 526 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL137159.1-201ENST00000452808 512 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 RPL30P15-201ENST00000457129 321 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 snoU13.30-201ENST00000458951 104 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 RN7SKP210-201ENST00000459176 261 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 RNU7-175P-201ENST00000515915 61 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 MIR449C-201ENST00000516047 92 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 RNU6-1213P-201ENST00000517075 94 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL590705.4-201ENST00000532209 134 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 CBX3P8-201ENST00000532412 525 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 MIR5696-201ENST00000578474 85 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 BNIP3P22-201ENST00000593399 556 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL158827.2-201ENST00000602494 330 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL132822.1-201ENST00000617063 513 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 AL691447.3-201ENST00000635020 330 ntBASIC2.38□□□□□ -2.03
BRF2Q9HAW0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms