Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 NACAP3-201ENST00000552100 481 ntBASIC3.56□□□□□ -1.84
BCAS3Q9H6U6 AL391261.3-201ENST00000557194 520 ntBASIC3.56□□□□□ -1.84
BCAS3Q9H6U6 uc_338.25-201ENST00000613756 156 ntBASIC3.56□□□□□ -1.84
BCAS3Q9H6U6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
BCAS3Q9H6U6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BCAS3Q9H6U6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.56□□□□□ -1.84
BCAS3Q9H6U6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC092268.1-201ENST00000342691 405 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RNU6-626P-201ENST00000363354 107 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 SNORD50.2-201ENST00000365465 70 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RNU6-541P-201ENST00000384709 110 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RNU6-21P-201ENST00000384710 107 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 SNORA46.1-201ENST00000391069 153 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 MTCO2P33-201ENST00000402100 465 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RNU2-61P-201ENST00000411069 191 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC007395.1-201ENST00000451333 677 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RNU6-861P-201ENST00000516745 106 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RNA5SP54-201ENST00000516951 92 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 CYCSP23-201ENST00000519781 313 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC021231.3-201ENST00000558497 370 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 MZT1P2-201ENST00000604387 248 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC132825.6-201ENST00000638861 357 ntBASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
BCAS3Q9H6U6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SNORA25.1-201ENST00000362326 128 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SNORD56.1-201ENST00000362913 68 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RNU5F-3P-201ENST00000363767 117 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 Y_RNA.240-201ENST00000364469 95 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SNORD6-201ENST00000365444 73 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RNU6-20P-201ENST00000384106 107 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SNORD67-201ENST00000390833 111 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 FTH1P15-201ENST00000406984 280 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RNU4-30P-201ENST00000410245 143 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RNU6-1001P-201ENST00000411265 100 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RPL19P1-201ENST00000411635 428 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 WARS2P1-201ENST00000429678 537 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RNU7-170P-201ENST00000459303 61 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 Y_RNA.638-201ENST00000459374 113 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RPL27AP5-201ENST00000469428 449 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RN7SL429P-201ENST00000479090 223 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AP001025.1-201ENST00000486139 332 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RN7SL489P-201ENST00000486185 223 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RN7SL327P-201ENST00000488659 223 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RPS27AP10-201ENST00000496103 208 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SNORA70.14-201ENST00000516205 110 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RNU7-110P-201ENST00000516891 62 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AC104027.1-201ENST00000521887 300 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AC087441.2-201ENST00000529141 262 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 MIR3690-201ENST00000580266 75 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 RN7SL853P-201ENST00000617250 223 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AC006386.2-201ENST00000624491 75 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 AC012005.1-201ENST00000624575 75 ntBASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BCAS3Q9H6U6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 RNU6-884P-201ENST00000363889 107 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 RNU6-918P-201ENST00000391219 106 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 RNA5SP390-201ENST00000410191 113 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 CST9LP2-201ENST00000437612 320 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 TMSB4XP3-201ENST00000445144 114 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 HMGN2P10-201ENST00000448085 265 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 AC091959.1-201ENST00000495857 238 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 AC233702.2-202ENST00000562547 291 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 MIR5695-201ENST00000579717 85 ntBASIC3.53□□□□□ -1.84
BCAS3Q9H6U6 AC020895.1-201ENST00000595362 272 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms