Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CHMP4BQ9H444 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 RNU6-1242P-201ENST00000391052 103 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 MED13P1-201ENST00000428342 171 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 USP9YP25-201ENST00000457708 443 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 AC007547.1-201ENST00000462177 490 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 PDCD5P2-201ENST00000507570 312 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 HSPE1P23-201ENST00000509838 286 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.77□□□□□ -2.29
CHMP4BQ9H444 MTND4LP18-201ENST00000526864 291 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 EIF4A1P12-201ENST00000551910 141 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 AL353149.1-201ENST00000610667 244 ntBASIC0.77□□□□□ -2.29
CHMP4BQ9H444 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
CHMP4BQ9H444 RNU1-76P-201ENST00000362903 159 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 RNU6-336P-201ENST00000364891 107 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 AC114482.1-201ENST00000418010 247 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 AC078809.1-201ENST00000427601 140 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 MTCO2P29-201ENST00000465212 189 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 AC091435.1-201ENST00000505442 584 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 AC090517.1-201ENST00000569307 266 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.76□□□□□ -2.29
CHMP4BQ9H444 uc_338.17-201ENST00000619633 179 ntBASIC0.76□□□□□ -2.29
CHMP4BQ9H444 RNU6-428P-201ENST00000362942 107 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 U3.4-201ENST00000363352 213 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 SNORD32A-201ENST00000364805 84 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RNU6-534P-201ENST00000364877 106 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RNU6-418P-201ENST00000384035 107 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 MIR92A1-201ENST00000385233 78 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RNU6-910P-201ENST00000390844 107 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RPS27AP14-201ENST00000422868 454 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RPL39P38-201ENST00000467018 153 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RPS23P5-201ENST00000495419 428 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 AC112204.1-201ENST00000502591 103 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RNU6-322P-201ENST00000516010 103 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 SNORA31.2-201ENST00000516019 134 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RNA5SP168-201ENST00000516642 112 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 RNU6-685P-201ENST00000517088 95 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.75□□□□□ -2.29
CHMP4BQ9H444 MIR4742-201ENST00000581069 85 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.75□□□□□ -2.29
CHMP4BQ9H444 AL139418.1-201ENST00000613613 177 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 MIR338-201ENST00000636369 67 ntBASIC0.75□□□□□ -2.29
CHMP4BQ9H444 Y_RNA.324-201ENST00000365165 102 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 RNU6-17P-201ENST00000384245 107 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 RNU6-18P-201ENST00000384527 107 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CHMP4BQ9H444 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CHMP4BQ9H444 SNORA26.3-201ENST00000391119 136 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 MTCO2P21-201ENST00000419780 677 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 GAPDHP17-201ENST00000449858 1001 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 HMGN1P12-201ENST00000499125 195 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 FABP5P5-201ENST00000515537 406 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 RN7SKP49-201ENST00000516675 260 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 AP003181.2-201ENST00000528941 181 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 AC004812.1-201ENST00000540773 146 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.74□□□□□ -2.29
CHMP4BQ9H444 CYP4A27P-201ENST00000567218 190 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 AL607023.1-201ENST00000620045 248 ntBASIC0.74□□□□□ -2.29
CHMP4BQ9H444 AC092268.1-201ENST00000342691 405 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 SNORA33-201ENST00000363664 130 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 Y_RNA.191-201ENST00000363972 113 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 SNORA72.2-201ENST00000365028 127 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 SNORD114-22-201ENST00000365423 72 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 RNU6-533P-201ENST00000384144 107 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 SNORD115.1-201ENST00000391109 76 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 ELOCP4-201ENST00000420090 333 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.73□□□□□ -2.29
CHMP4BQ9H444 RAB28P5-201ENST00000427490 651 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 USP9YP28-201ENST00000435142 589 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.73□□□□□ -2.29
CHMP4BQ9H444 C1DP4-201ENST00000455429 424 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AC067942.3-201ENST00000512025 362 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AC105129.3-201ENST00000605455 485 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 MIR8070-201ENST00000616510 88 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 AC004808.1-201ENST00000627671 721 ntBASIC0.73□□□□□ -2.29
CHMP4BQ9H444 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
CHMP4BQ9H444 Y_RNA.22-201ENST00000362492 102 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 RNU6-545P-201ENST00000362681 104 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 RNU6-552P-201ENST00000362869 119 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 RNU6-660P-201ENST00000364566 109 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 RNU6-45P-201ENST00000384471 107 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 RNU6-636P-201ENST00000384598 107 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.72□□□□□ -2.29
CHMP4BQ9H444 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CHMP4BQ9H444 AC090142.3-201ENST00000519012 385 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 TMF1P1-201ENST00000576058 373 ntBASIC0.72□□□□□ -2.29
CHMP4BQ9H444 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.72□□□□□ -2.29
CHMP4BQ9H444 MTATP6P3-201ENST00000581686 676 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms