Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-107P-201ENST00000516643 102 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 SNRPGP15-201ENST00000600149 222 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 AC108081.1-201ENST00000604358 221 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 U6.95-201ENST00000636931 70 ntBASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.32□□□□□ -1.72
NUCKS1Q9H1E3 ADAM3A-203ENST00000461344 2157 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-728P-201ENST00000365375 104 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.368-201ENST00000365547 113 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 RNU1-13P-201ENST00000384499 162 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 MIR124-3-201ENST00000384866 87 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-710P-201ENST00000410424 105 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 YPEL5P1-201ENST00000419731 367 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 HMGN2P30-201ENST00000423237 256 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 snoU13.4-201ENST00000458916 104 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 AC090525.1-201ENST00000479116 478 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 RN7SKP21-201ENST00000516503 220 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 MIR5688-201ENST00000580619 83 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 ZYXP1-201ENST00000617638 118 ntBASIC4.31□□□□□ -1.72
NUCKS1Q9H1E3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AL136164.4-201ENST00000625013 2135 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-1205P-201ENST00000363625 106 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RNA5SP130-201ENST00000364431 114 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RNA5SP479-201ENST00000364858 117 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RNA5SP167-201ENST00000365461 116 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-217P-201ENST00000384164 104 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RPL21P17-201ENST00000397467 475 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 HSPE1P12-201ENST00000412576 301 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AL356095.1-201ENST00000417217 199 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AIMP1P2-201ENST00000425294 312 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AL714022.1-201ENST00000439897 151 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 RPL31P41-201ENST00000477967 372 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 SNORD33.1-201ENST00000516213 88 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 NDUFA5P6-201ENST00000542110 379 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AC007224.1-201ENST00000564410 144 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AC012468.1-201ENST00000604888 430 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 MIR6867-201ENST00000610636 67 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUCKS1Q9H1E3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 RN7SKP280-201ENST00000364196 304 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 RNA5SP515-201ENST00000364570 118 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 HMGN2P8-201ENST00000391458 268 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 MIR320B2-201ENST00000408479 138 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-855P-201ENST00000410395 104 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 CYCSP49-201ENST00000420810 319 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 RNU7-141P-201ENST00000459304 62 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 AC103975.1-201ENST00000482506 483 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 RNA5SP143-201ENST00000516936 115 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 CYP4A27P-201ENST00000567218 190 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 AC009163.5-201ENST00000575421 637 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 SNRPGP20-201ENST00000604477 205 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 AC068647.2-201ENST00000637380 353 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 CENPCP1-201ENST00000533085 2578 ntBASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUCKS1Q9H1E3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 MIR372-201ENST00000362225 67 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 RNU6-1082P-201ENST00000364574 107 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.310-201ENST00000365063 113 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.341-201ENST00000365341 102 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 MIR208B-201ENST00000401172 77 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 RN7SL93P-201ENST00000463035 293 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 Y_RNA.757-201ENST00000578934 114 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 MIR3121-201ENST00000579680 77 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 AC011471.1-201ENST00000585766 187 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 RNA5SP196-201ENST00000625967 102 ntBASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUCKS1Q9H1E3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 SPRR2C-201ENST00000290702 219 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 Y_RNA.243-201ENST00000364481 109 ntBASIC4.27□□□□□ -1.73
NUCKS1Q9H1E3 RNU6-1280P-201ENST00000365211 107 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms