Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CTDSP1Q9GZU7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CTDSP1Q9GZU7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CTDSP1Q9GZU7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CTDSP1Q9GZU7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CTDSP1Q9GZU7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CTDSP1Q9GZU7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.126-201ENST00000363382 111 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 RNA5SP283-201ENST00000365604 119 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 MIR300-201ENST00000401138 83 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC004866.1-201ENST00000411748 78 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC005534.2-201ENST00000431047 433 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 SNORD105B-201ENST00000458770 79 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 U8.22-201ENST00000459141 133 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 RNU7-14P-201ENST00000459331 62 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 CYCSP23-201ENST00000519781 313 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC093023.1-201ENST00000547375 507 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC020661.2-201ENST00000560114 134 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 MIR4286-201ENST00000580651 93 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC125232.2-201ENST00000592457 143 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AC010999.1-201ENST00000611856 324 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 MIR6875-201ENST00000617506 72 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 U2.1-201ENST00000618978 145 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 AL606534.2-204ENST00000635008 178 ntBASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CTDSP1Q9GZU7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 RNU6-793P-201ENST00000384233 104 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 EDDM3CP-201ENST00000415977 425 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 MCFD2P1-201ENST00000417812 300 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 MTND4P19-201ENST00000446659 478 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 HMGN2P18-201ENST00000450680 270 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC007395.1-201ENST00000451333 677 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC016925.1-201ENST00000458303 298 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 RN7SL20P-201ENST00000488827 297 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 ATP5EP1-201ENST00000510257 156 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC074250.1-201ENST00000511117 192 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 RNU4-77P-201ENST00000516692 156 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 RNA5SP490-201ENST00000517141 136 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 RN7SKP295-201ENST00000517264 153 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AP002770.2-201ENST00000543613 532 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AL442163.3-201ENST00000554110 156 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 ANP32BP3-201ENST00000559213 706 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC007224.1-201ENST00000564410 144 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 SNORD11B-201ENST00000607707 90 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 uc_338.25-201ENST00000613756 156 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 AC008873.1-201ENST00000625051 138 ntBASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CTDSP1Q9GZU7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 MIR329-1-201ENST00000385028 80 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 MTCO3P19-201ENST00000415864 321 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 CHEK2P4-201ENST00000450340 246 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AL137159.1-201ENST00000452808 512 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 RBMY2UP-201ENST00000453474 324 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC093259.1-201ENST00000509755 300 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 SNORA4.4-201ENST00000515921 135 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 SNORA25.10-201ENST00000515926 124 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 SNORA40.14-201ENST00000516543 86 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 RN7SKP49-201ENST00000516675 260 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 RNA5SP137-201ENST00000516833 135 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC022868.1-201ENST00000517767 391 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 RNU6-988P-201ENST00000519081 107 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC026271.5-201ENST00000577873 130 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC090115.4-201ENST00000609970 188 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC006157.1-201ENST00000611750 366 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 AC006133.1-201ENST00000617106 264 ntBASIC2.34□□□□□ -2.03
CTDSP1Q9GZU7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CTDSP1Q9GZU7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.34□□□□□ -2.04
CTDSP1Q9GZU7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.34□□□□□ -2.04
CTDSP1Q9GZU7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CTDSP1Q9GZU7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.33□□□□□ -2.04
CTDSP1Q9GZU7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
CTDSP1Q9GZU7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.33□□□□□ -2.04
CTDSP1Q9GZU7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms