Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AL627390.1-201ENST00000396055 340 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 MIR1267-201ENST00000408723 78 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 JTBP1-201ENST00000441314 247 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC007677.1-201ENST00000445757 515 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 RNU7-63P-201ENST00000459054 62 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 CCDC34P1-201ENST00000507441 517 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 MIR4424-201ENST00000585257 86 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 VN1R80P-201ENST00000597126 338 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC069114.2-201ENST00000604699 304 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC087752.4-201ENST00000605911 462 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 HULC.1-201ENST00000612720 240 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 AC083806.3-201ENST00000614016 455 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 uc_338.34-201ENST00000617467 174 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SLIRPQ9GZT3 ZNF72P-201ENST00000425869 1908 ntBASIC1.15□□□□□ -2.22
SLIRPQ9GZT3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
SLIRPQ9GZT3 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNU6-862P-201ENST00000362804 105 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNU6-203P-201ENST00000384038 104 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 HSPE1P9-201ENST00000440046 311 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 USP9YP29-201ENST00000445112 563 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 AL163973.1-201ENST00000484753 577 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 AC079140.3-201ENST00000511111 550 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 SNORA31.24-201ENST00000517232 57 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNA5SP437-201ENST00000517249 129 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 MTND4P7-201ENST00000523876 130 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 HMGB1P33-201ENST00000563485 527 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 AC010615.1-201ENST00000594254 1764 ntBASIC1.15□□□□□ -2.23
SLIRPQ9GZT3 RNU6-562P-201ENST00000362731 107 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 SNORA63D-201ENST00000364359 132 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 SNORD73A-201ENST00000386062 65 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AL117342.1-201ENST00000404861 406 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RNU4-26P-201ENST00000410270 107 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 EBAG9P1-201ENST00000418955 543 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 ARL5AP1-201ENST00000418991 388 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 MTCO2P19-201ENST00000427513 598 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 FTH1P12-201ENST00000432137 551 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 MTCO2P18-201ENST00000457151 658 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RPS29P27-201ENST00000463711 170 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RPL36AP21-201ENST00000490372 323 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 MTCYBP18-201ENST00000501056 747 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AC067942.3-201ENST00000512025 362 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 SNORA14.1-201ENST00000516113 141 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RNU6-856P-201ENST00000516959 98 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AP003033.1-201ENST00000527244 415 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AC087683.1-201ENST00000591187 441 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 NIFKP6-201ENST00000598115 845 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AL391646.1-201ENST00000603860 190 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AC009318.2-201ENST00000610917 651 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AC073114.1-201ENST00000612027 490 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 MIR6852-201ENST00000621699 66 ntBASIC1.14□□□□□ -2.23
SLIRPQ9GZT3 AC009541.1-201ENST00000438279 2662 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 SNORD114-1-201ENST00000362705 72 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 MIR504-201ENST00000385065 83 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 USP9YP28-201ENST00000435142 589 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 HMGN2P9-201ENST00000476875 229 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AC099513.1-201ENST00000490423 301 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 RPS29P21-201ENST00000496272 170 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AC108078.1-201ENST00000508073 725 ntBASIC1.13□□□□□ -2.23
SLIRPQ9GZT3 AC010493.1-201ENST00000513479 292 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms