Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 MIR340-201ENST00000362125 95 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 Y_RNA.123-201ENST00000363338 102 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 RNU6-254P-201ENST00000363377 107 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 RNU6-1286P-201ENST00000383871 107 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 RNU6-128P-201ENST00000383976 107 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AL590002.1-201ENST00000406554 418 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC016907.1-201ENST00000419483 435 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC139712.2-201ENST00000424302 339 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC027124.2-201ENST00000428249 105 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 NDUFA5P4-201ENST00000436704 385 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC016925.1-201ENST00000458303 298 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 snoU13.6-201ENST00000458785 104 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 RNVU1-2-201ENST00000516326 135 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 RNU6-314P-201ENST00000516574 104 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC026371.1-201ENST00000551867 419 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 FGF7P1-201ENST00000582820 288 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 MIR8076-201ENST00000611401 83 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AC064859.1-201ENST00000624741 174 ntBASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
THUMPD3Q9BV44 RNU5B-2P-201ENST00000363036 113 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 RNY3P3-201ENST00000363816 102 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 RNU6-933P-201ENST00000384424 107 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 RNU6-1026P-201ENST00000384465 108 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 SNORA12.2-201ENST00000391040 156 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 SNRPEP10-201ENST00000420249 274 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 SRIP2-201ENST00000428470 166 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 Y_RNA.665-201ENST00000516177 98 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 AC010900.2-201ENST00000604508 210 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 DUXAP9-208ENST00000622815 614 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.93□□□□□ -2.1
THUMPD3Q9BV44 Y_RNA.373-201ENST00000365600 103 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 SNORA11.2-201ENST00000408318 127 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 RNA5SP425-201ENST00000410336 112 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 RNA5SP494-201ENST00000410653 129 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 RPS26P42-201ENST00000413485 326 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 HMGN2P38-201ENST00000423806 265 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AL353705.4-201ENST00000449661 238 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC007395.1-201ENST00000451333 677 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC130509.1-201ENST00000464158 433 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 RPL23AP94-201ENST00000512518 302 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC097065.2-201ENST00000608159 533 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.92□□□□□ -2.1
THUMPD3Q9BV44 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RNU6-562P-201ENST00000362731 107 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RNU6-451P-201ENST00000362921 107 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RNU6-623P-201ENST00000363143 105 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 SNORD113-7-201ENST00000363762 77 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 SNORA18.2-201ENST00000383865 132 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RNU6-968P-201ENST00000384076 107 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 MIR521-1-201ENST00000384902 87 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 MIR181A1-201ENST00000385026 110 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 SNORA3.2-201ENST00000408221 125 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RN7SKP32-201ENST00000410167 303 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 USP9YP28-201ENST00000435142 589 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 HMGN2P26-201ENST00000463169 339 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 AC008549.1-201ENST00000512900 643 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 GNAI2P1-201ENST00000541815 315 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 AC104458.1-201ENST00000608243 463 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 AF250324.2-201ENST00000608299 610 ntBASIC1.91□□□□□ -2.1
THUMPD3Q9BV44 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms