Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MRPS36P2-201ENST00000512569 299 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 AC009163.5-201ENST00000575421 637 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 AL590808.1-201ENST00000618696 141 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 Y_RNA.818-201ENST00000618813 71 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 U6.115-201ENST00000636045 103 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 U6.105-201ENST00000637379 88 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 MFSD8-242ENST00000641690 4199 ntBASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.23□□□□□ -1.73
CNTNAP3BQ96NU0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 Y_RNA.49-201ENST00000362714 112 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 MIR128-1-201ENST00000384921 82 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 Y_RNA.587-201ENST00000391210 103 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 RN7SKP101-201ENST00000411376 320 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 CALM2P4-201ENST00000430810 426 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AL021397.1-201ENST00000451806 248 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AC139453.2-201ENST00000487255 133 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AC117454.1-201ENST00000491120 168 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 SNORA31.23-201ENST00000517219 133 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AC093249.4-201ENST00000564755 259 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AL451007.1-201ENST00000595491 289 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 SNRPGP20-201ENST00000604477 205 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AL021997.2-201ENST00000615674 271 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 uc_338.13-201ENST00000618243 179 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AL035470.1-201ENST00000622571 220 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 MIR3651-201ENST00000630427 90 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 MIR2052-201ENST00000636055 55 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 AC027290.2-201ENST00000623210 18662 ntBASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNTNAP3BQ96NU0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.21□□□□□ -1.73
CNTNAP3BQ96NU0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 SNORA31-201ENST00000362607 130 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-487P-201ENST00000365430 104 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP167-201ENST00000365461 116 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 Y_RNA.432-201ENST00000384087 111 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RNU6-301P-201ENST00000384277 107 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 U3.26-201ENST00000391236 204 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP129-201ENST00000410276 118 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 Y_RNA.593-201ENST00000410292 98 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 HSPE1P12-201ENST00000412576 301 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RPS26P2-201ENST00000440331 348 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 AC010531.2-201ENST00000465012 153 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP154-201ENST00000516193 111 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 SNORA31.16-201ENST00000516773 139 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 RNU1-104P-201ENST00000517280 175 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 AC011602.1-201ENST00000546484 331 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 CYCSP40-201ENST00000575927 294 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNTNAP3BQ96NU0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 AC016588.2-201ENST00000632484 3021 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 Y_RNA.52-201ENST00000362760 96 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 MIR320B2-201ENST00000408479 138 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 RNA5SP390-201ENST00000410191 113 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 RPS27AP10-201ENST00000496103 208 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 RN7SKP57-201ENST00000517248 293 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 FAM71BP1-201ENST00000604431 523 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 AL021707.8-201ENST00000609428 183 ntBASIC4.2□□□□□ -1.74
CNTNAP3BQ96NU0 LINC00901.1-201ENST00000617252 152 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms