Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR449C-201ENST00000516047 92 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 RNU6-586P-201ENST00000517265 104 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 AC136628.3-201ENST00000521868 290 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 MIR3684-201ENST00000579779 74 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 AL078604.3-201ENST00000615580 211 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 MIR3653-201ENST00000625572 110 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 MIR7515-201ENST00000637837 67 ntBASIC4.21□□□□□ -1.74
CALR3Q96L12 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CALR3Q96L12 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CALR3Q96L12 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CALR3Q96L12 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 AC015813.6-201ENST00000624409 5808 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CALR3Q96L12 RNU1-72P-201ENST00000362976 153 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 Y_RNA.240-201ENST00000364469 95 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 RNA5SP509-201ENST00000364577 119 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 RNA5SP505-201ENST00000364748 108 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 MIR1283-1-201ENST00000408494 87 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 MIR1185-2-201ENST00000408687 86 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.2□□□□□ -1.74
CALR3Q96L12 AL392103.1-201ENST00000447000 198 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 SEM1P1-201ENST00000506694 209 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 HMGB3P3-201ENST00000510526 400 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 RNU6-255P-201ENST00000516957 105 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.2□□□□□ -1.74
CALR3Q96L12 CYCSP29-201ENST00000533731 318 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.2□□□□□ -1.74
CALR3Q96L12 AL713866.2-201ENST00000603579 219 ntBASIC4.2□□□□□ -1.74
CALR3Q96L12 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.2□□□□□ -1.74
CALR3Q96L12 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.2□□□□□ -1.74
CALR3Q96L12 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CALR3Q96L12 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.2□□□□□ -1.74
CALR3Q96L12 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.2□□□□□ -1.74
CALR3Q96L12 RNU6-944P-201ENST00000364023 107 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 RNU6-234P-201ENST00000365229 104 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 RNU6-763P-201ENST00000390865 106 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 AL357139.1-201ENST00000407792 426 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 U6atac.2-201ENST00000408644 118 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 RN7SKP51-201ENST00000410781 304 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 RNU6-1328P-201ENST00000410938 106 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 AC016769.2-201ENST00000414815 475 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 RPL30P4-201ENST00000429309 333 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CALR3Q96L12 RPS12P18-201ENST00000442381 270 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 AC074290.1-201ENST00000448883 135 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 RN7SL860P-201ENST00000473738 223 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 AC091167.1-201ENST00000492017 396 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CALR3Q96L12 SCARNA3-201ENST00000517097 143 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.19□□□□□ -1.74
CALR3Q96L12 AC011944.2-201ENST00000624440 683 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 AL049781.1-201ENST00000623195 3585 ntBASIC4.19□□□□□ -1.74
CALR3Q96L12 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CALR3Q96L12 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CALR3Q96L12 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CALR3Q96L12 MIR383-201ENST00000362257 73 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 RNU6-774P-201ENST00000363238 107 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 RNU6-801P-201ENST00000364087 105 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 Y_RNA.361-201ENST00000365515 120 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 AC126124.2-201ENST00000413542 321 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 RPS29P22-201ENST00000472363 168 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 SNORA70.12-201ENST00000516084 153 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 RN7SKP209-201ENST00000516888 304 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.18□□□□□ -1.74
CALR3Q96L12 MIR4753-201ENST00000585119 83 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 MIR8058-201ENST00000615737 89 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 MIR7703-201ENST00000620784 77 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.18□□□□□ -1.74
CALR3Q96L12 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CALR3Q96L12 CEP170P1-201ENST00000502249 4587 ntBASIC4.18□□□□□ -1.74
CALR3Q96L12 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CALR3Q96L12 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.18□□□□□ -1.74
CALR3Q96L12 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CALR3Q96L12 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.17□□□□□ -1.74
CALR3Q96L12 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 AC114982.1-201ENST00000469402 321 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 RN7SL738P-201ENST00000470264 297 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CALR3Q96L12 RPS29P2-201ENST00000479278 136 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 RNU6-1278P-201ENST00000516130 107 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 RNU6-789P-201ENST00000517105 102 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.17□□□□□ -1.74
CALR3Q96L12 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CALR3Q96L12 AC018630.3-201ENST00000542637 96 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 MIR5096-201ENST00000583713 70 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.17□□□□□ -1.74
CALR3Q96L12 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CALR3Q96L12 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.17□□□□□ -1.74
CALR3Q96L12 AL355480.1-201ENST00000629041 99 ntBASIC4.17□□□□□ -1.74
CALR3Q96L12 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CALR3Q96L12 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.17□□□□□ -1.74
CALR3Q96L12 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CALR3Q96L12 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CALR3Q96L12 Z82209.1-201ENST00000422141 2135 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CALR3Q96L12 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CALR3Q96L12 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CALR3Q96L12 SNORA58B-201ENST00000364259 136 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms