Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
MS4A3Q96HJ5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 Y_RNA.241-201ENST00000364470 117 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RNA5SP132-201ENST00000364725 118 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RNU6-1319P-201ENST00000390855 104 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RNU6-747P-201ENST00000390928 104 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RNU6-241P-201ENST00000391148 104 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RNU6-177P-201ENST00000411257 104 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AL109933.2-201ENST00000452651 260 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AZGP1P2-201ENST00000454506 345 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AC106707.2-201ENST00000484182 374 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AC078918.1-201ENST00000498515 228 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RNU7-2P-201ENST00000516096 62 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AL160290.3-201ENST00000604869 165 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 MIR8080-201ENST00000622224 89 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AL355480.1-201ENST00000629041 99 ntBASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A3Q96HJ5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-39-201ENST00000363694 82 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 RNU1-77P-201ENST00000390868 162 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 RPS27P18-201ENST00000431701 247 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 HMGN2P18-201ENST00000450680 270 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 AC040958.1-201ENST00000561102 201 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 MIR3152-201ENST00000579801 74 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 MIR7853-201ENST00000584820 132 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 AC000068.2-201ENST00000608816 460 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 AC004817.4-201ENST00000602396 3625 ntBASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A3Q96HJ5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 SNORA22.1-201ENST00000362701 134 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 SNORA51.1-201ENST00000363243 140 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 MIR548G-201ENST00000408442 89 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 RNU1-98P-201ENST00000458992 160 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 RNU7-23P-201ENST00000459465 62 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 AC090821.2-201ENST00000523552 176 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 MIR6768-201ENST00000610734 72 ntBASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.75□□□□□ -1.65
MS4A3Q96HJ5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 USP8P1-201ENST00000494673 3183 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-34-201ENST00000362441 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-12-201ENST00000362583 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-29-201ENST00000362834 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-9-201ENST00000362912 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-21-201ENST00000362963 81 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-14-201ENST00000363090 81 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-41-201ENST00000363608 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-11-201ENST00000363616 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-5-201ENST00000363633 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RN7SKP160-201ENST00000363804 340 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-4-201ENST00000363810 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-6-201ENST00000363942 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-42-201ENST00000364273 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-15-201ENST00000364809 81 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-26-201ENST00000365067 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-10-201ENST00000365073 81 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-43-201ENST00000365503 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD115-36-201ENST00000365629 82 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORD56.6-201ENST00000384569 71 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 SNORA80E-201ENST00000384744 137 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 MIR143-201ENST00000385300 106 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RNA5SP487-201ENST00000410186 122 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RNU6-519P-201ENST00000410590 108 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 COX5BP7-201ENST00000414780 274 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 RN7SL188P-201ENST00000469842 285 ntBASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A3Q96HJ5 ATP5LP3-201ENST00000514223 304 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms