Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
IFT43Q96FT9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
IFT43Q96FT9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC010889.1-201ENST00000566193 2666 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 Y_RNA.127-201ENST00000363386 109 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 RNU6-215P-201ENST00000365169 102 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 RNU6-198P-201ENST00000384258 104 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 SNORA8.3-201ENST00000384679 139 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 MIR147B-201ENST00000390185 80 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 RNU6-710P-201ENST00000410424 105 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AL137159.1-201ENST00000452808 512 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC010099.1-201ENST00000455434 375 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC091179.1-201ENST00000461606 579 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 RN7SL93P-201ENST00000463035 293 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 AP002884.2-201ENST00000471647 395 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 RN7SL271P-201ENST00000487601 295 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC090616.3-201ENST00000582184 217 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 MIR5006-201ENST00000583027 110 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 AL137843.1-201ENST00000605078 385 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC069294.1-201ENST00000608397 350 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 MIR7151-201ENST00000617477 60 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
IFT43Q96FT9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.1□□□□□ -1.75
IFT43Q96FT9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
IFT43Q96FT9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
IFT43Q96FT9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.09□□□□□ -1.75
IFT43Q96FT9 AC010329.5-201ENST00000623497 2174 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 SNORD115-30-201ENST00000364117 82 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 Y_RNA.261-201ENST00000364631 102 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 Y_RNA.287-201ENST00000364853 94 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 RNU4-11P-201ENST00000365287 132 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 MIR626-201ENST00000385032 94 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 AL031003.1-201ENST00000404229 172 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
IFT43Q96FT9 MTND4LP9-201ENST00000427694 174 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
IFT43Q96FT9 AC145146.1-201ENST00000496370 254 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 AP000867.2-201ENST00000532468 320 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
IFT43Q96FT9 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 MIR6875-201ENST00000617506 72 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
IFT43Q96FT9 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
IFT43Q96FT9 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
IFT43Q96FT9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.09□□□□□ -1.75
IFT43Q96FT9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
IFT43Q96FT9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
IFT43Q96FT9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
IFT43Q96FT9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
IFT43Q96FT9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IFT43Q96FT9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IFT43Q96FT9 MIR539-201ENST00000365690 78 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 SNORA18.2-201ENST00000383865 132 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
IFT43Q96FT9 SNORA26.5-201ENST00000391215 123 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.08□□□□□ -1.76
IFT43Q96FT9 SNRPGP5-201ENST00000456003 220 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 RPS3P1-201ENST00000456781 192 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 SNORA84-201ENST00000459229 133 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.08□□□□□ -1.76
IFT43Q96FT9 DEFB131C-201ENST00000528817 165 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 AC244505.7-201ENST00000599675 272 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 AL138880.2-201ENST00000616214 239 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 AL591424.2-201ENST00000617023 128 ntBASIC4.08□□□□□ -1.76
IFT43Q96FT9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
IFT43Q96FT9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.08□□□□□ -1.76
IFT43Q96FT9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
IFT43Q96FT9 UBE3AP2-201ENST00000429033 2259 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.07□□□□□ -1.76
IFT43Q96FT9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNU1-75P-201ENST00000347264 129 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
IFT43Q96FT9 Y_RNA.243-201ENST00000364481 109 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 Y_RNA.293-201ENST00000364908 93 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 MIR23B-201ENST00000384832 97 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 MIR554-201ENST00000384874 96 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNU6-750P-201ENST00000390946 107 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNA5SP504-201ENST00000410676 117 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 AL135790.2-201ENST00000437701 267 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.07□□□□□ -1.76
IFT43Q96FT9 SNORA25.12-201ENST00000516202 82 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNU2-44P-201ENST00000516795 194 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNU6-971P-201ENST00000516920 106 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 RNU1-117P-201ENST00000517041 158 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.07□□□□□ -1.76
IFT43Q96FT9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.07□□□□□ -1.76
IFT43Q96FT9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.07□□□□□ -1.76
IFT43Q96FT9 AC244205.2-202ENST00000635781 342 ntBASIC4.07□□□□□ -1.76
IFT43Q96FT9 AC002546.1-201ENST00000588041 2504 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms