Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SNORA53-201ENST00000391141 249 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 RNA5SP120-201ENST00000410900 112 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.68□□□□□ -1.82
BRF1Q92994 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.68□□□□□ -1.82
BRF1Q92994 RPS15AP5-201ENST00000436276 388 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.68□□□□□ -1.82
BRF1Q92994 AL358232.1-201ENST00000448030 501 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 AC245166.1-201ENST00000521012 253 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 MIR5680-201ENST00000577577 84 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 AC069200.1-201ENST00000609511 323 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.68□□□□□ -1.82
BRF1Q92994 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
BRF1Q92994 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.68□□□□□ -1.82
BRF1Q92994 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRF1Q92994 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
BRF1Q92994 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRF1Q92994 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRF1Q92994 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF1Q92994 AC093010.3-201ENST00000570269 15214 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.67□□□□□ -1.82
BRF1Q92994 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRF1Q92994 RNU6-626P-201ENST00000363354 107 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AP000567.1-201ENST00000406413 156 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 PTGES3P4-201ENST00000426243 356 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC112220.1-201ENST00000434628 355 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF1Q92994 snoU13.6-201ENST00000458785 104 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 RN7SL601P-201ENST00000471221 293 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC117440.1-201ENST00000474107 571 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC109925.1-201ENST00000478069 331 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 RNU2-31P-201ENST00000516954 155 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 CYCSP23-201ENST00000519781 313 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AP000867.2-201ENST00000532468 320 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.67□□□□□ -1.82
BRF1Q92994 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF1Q92994 MIR3136-201ENST00000583498 78 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 UBL5P2-201ENST00000583788 219 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC004792.1-201ENST00000614523 137 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC084757.4-201ENST00000616350 526 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC068831.7-201ENST00000616954 363 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 AC018692.3-201ENST00000623929 123 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF1Q92994 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF1Q92994 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
BRF1Q92994 AL136164.4-201ENST00000625013 2135 ntBASIC3.67□□□□□ -1.82
BRF1Q92994 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRF1Q92994 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF1Q92994 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF1Q92994 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.66□□□□□ -1.82
BRF1Q92994 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF1Q92994 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF1Q92994 AL079305.1-201ENST00000623159 3008 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.66□□□□□ -1.82
BRF1Q92994 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
BRF1Q92994 RNA5SP72-201ENST00000364442 117 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 Y_RNA.286-201ENST00000364813 102 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 RNU6-20P-201ENST00000384106 107 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 SNORA7.4-201ENST00000384249 137 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 RNU6-19P-201ENST00000384718 107 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 MIR23B-201ENST00000384832 97 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 RNA5SP38-201ENST00000410750 119 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF1Q92994 AC096649.2-201ENST00000416186 393 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AC019205.3-201ENST00000424573 156 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AC007395.1-201ENST00000451333 677 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AL138752.1-201ENST00000452964 351 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF1Q92994 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 SNORA31.16-201ENST00000516773 139 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AL356575.1-201ENST00000603008 283 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 AC005520.5-201ENST00000613926 164 ntBASIC3.66□□□□□ -1.82
BRF1Q92994 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF1Q92994 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
BRF1Q92994 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
BRF1Q92994 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.82
BRF1Q92994 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
BRF1Q92994 BX322639.1-202ENST00000423987 2213 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 Y_RNA.44-201ENST00000362676 108 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 RNU6-873P-201ENST00000363833 107 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 RNU6-961P-201ENST00000363893 105 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
BRF1Q92994 SNORD67-201ENST00000390833 111 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 MIR1298-201ENST00000408783 112 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 RNU4-47P-201ENST00000410876 114 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.65□□□□□ -1.83
BRF1Q92994 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.65□□□□□ -1.83
BRF1Q92994 PRELID3BP1-201ENST00000457142 540 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.65□□□□□ -1.83
BRF1Q92994 AC107626.1-201ENST00000471084 183 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 AC090525.1-201ENST00000479116 478 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 SNORA40.9-201ENST00000515895 93 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 CYP4A27P-201ENST00000567218 190 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 AC010999.1-201ENST00000611856 324 ntBASIC3.65□□□□□ -1.83
BRF1Q92994 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BRF1Q92994 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.64□□□□□ -1.83
BRF1Q92994 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRF1Q92994 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms