Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RNU6-418P-201ENST00000384035 107 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 RNU6-163P-201ENST00000384396 106 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 SNORD99-201ENST00000408612 74 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.21□□□□□ -2.38
AP3S1Q92572 AC010154.1-201ENST00000425857 269 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AC010975.2-201ENST00000427781 588 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.21□□□□□ -2.38
AP3S1Q92572 MTND1P32-201ENST00000433043 938 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 USP9YP28-201ENST00000435142 589 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.21□□□□□ -2.38
AP3S1Q92572 RPL39P39-201ENST00000455840 151 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AP000797.1-201ENST00000478870 387 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AC022493.2-201ENST00000506122 481 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 FABP5P5-201ENST00000515537 406 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 RNU6-1053P-201ENST00000515930 101 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.21□□□□□ -2.38
AP3S1Q92572 MTATP6P3-201ENST00000581686 676 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AL512605.2-201ENST00000592972 256 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AC024060.1-201ENST00000607052 494 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AC108747.1-201ENST00000609508 535 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AC093913.1-201ENST00000614178 329 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AL513423.1-201ENST00000621695 132 ntBASIC0.21□□□□□ -2.38
AP3S1Q92572 AL445523.1-201ENST00000451184 1362 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
AP3S1Q92572 AL589826.1-201ENST00000340697 249 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 RNU4-76P-201ENST00000364509 141 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 SNORD116-13-201ENST00000384408 92 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 SNORD41-201ENST00000386967 70 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 RN7SKP200-201ENST00000410564 320 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 AC078809.1-201ENST00000427601 140 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 AL049830.1-201ENST00000468034 425 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.2□□□□□ -2.38
AP3S1Q92572 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.2□□□□□ -2.38
AP3S1Q92572 SNORA68.3-201ENST00000515906 83 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 RNU6-1146P-201ENST00000516282 102 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 RNU7-51P-201ENST00000516560 62 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 MIR4769-201ENST00000584126 77 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 AL356157.2-201ENST00000605122 111 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 AC243829.6-201ENST00000612652 106 ntBASIC0.2□□□□□ -2.38
AP3S1Q92572 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.2□□□□□ -2.38
AP3S1Q92572 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.2□□□□□ -2.38
AP3S1Q92572 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
AP3S1Q92572 AC073343.1-201ENST00000328239 651 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 SNORA26.3-201ENST00000391119 136 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.19□□□□□ -2.38
AP3S1Q92572 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.19□□□□□ -2.38
AP3S1Q92572 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.19□□□□□ -2.38
AP3S1Q92572 SNORA70.12-201ENST00000516084 153 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.19□□□□□ -2.38
AP3S1Q92572 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.19□□□□□ -2.38
AP3S1Q92572 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.19□□□□□ -2.38
AP3S1Q92572 MTND4LP25-201ENST00000570218 163 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 MIR5692A1-201ENST00000580523 69 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 AC008507.2-201ENST00000588402 1176 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 AL390123.1-201ENST00000603216 237 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 AL357312.1-201ENST00000603879 298 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 AL139286.2-201ENST00000606838 396 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.19□□□□□ -2.38
AP3S1Q92572 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.19□□□□□ -2.38
AP3S1Q92572 MTND4P5-201ENST00000435821 1374 ntBASIC0.19□□□□□ -2.38
AP3S1Q92572 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
AP3S1Q92572 MIR653-201ENST00000385279 96 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 SNORA75.2-201ENST00000391138 150 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 SNORA75.3-201ENST00000391231 150 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 MIR300-201ENST00000401138 83 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 AL133217.1-201ENST00000450980 425 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 U7.7-201ENST00000459276 60 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.18□□□□□ -2.38
AP3S1Q92572 RNU6-123P-201ENST00000516163 102 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 SNORA31.10-201ENST00000516482 106 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 AC013828.2-201ENST00000532487 235 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
AP3S1Q92572 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.18□□□□□ -2.38
AP3S1Q92572 AC090517.1-201ENST00000569307 266 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 Z98751.3-201ENST00000604447 521 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 AP002360.4-201ENST00000606980 481 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.18□□□□□ -2.38
AP3S1Q92572 AL603839.4-201ENST00000624658 1005 ntBASIC0.18□□□□□ -2.38
AP3S1Q92572 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
AP3S1Q92572 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
AP3S1Q92572 Y_RNA.46-201ENST00000362695 102 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 RNU6-371P-201ENST00000364283 108 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 VTRNA1-3-201ENST00000365645 89 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 RNU6-723P-201ENST00000383973 107 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 RNU6-378P-201ENST00000384324 107 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 RNU6-293P-201ENST00000411259 106 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 AC098934.3-201ENST00000430450 190 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 HMGN2P34-201ENST00000437647 269 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 DAP3P1-201ENST00000441522 278 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 AL606517.2-201ENST00000442855 241 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.17□□□□□ -2.38
AP3S1Q92572 AC007327.1-201ENST00000447461 264 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 AC022364.2-201ENST00000457963 554 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.17□□□□□ -2.38
AP3S1Q92572 AC090049.2-201ENST00000550377 109 ntBASIC0.17□□□□□ -2.38
AP3S1Q92572 AL359740.1-201ENST00000624340 592 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms