Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.650-201ENST00000459002 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNU7-87P-201ENST00000459343 62 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 U8.21-201ENST00000459536 136 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AP001324.2-201ENST00000461163 319 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RPL30P14-201ENST00000482744 348 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 ANXA2P1-201ENST00000505539 926 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNY3P16-201ENST00000516338 101 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-62P-201ENST00000516526 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.777-201ENST00000516982 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-711P-201ENST00000517255 106 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AC103996.1-201ENST00000555468 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 MIR1273C-201ENST00000578669 77 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 MIR4308-201ENST00000580634 81 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.771-201ENST00000598668 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.789-201ENST00000622480 102 ntBASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SH3RF3Q8TEJ3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 SNORD20-201ENST00000384550 80 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 SNORD78.2-201ENST00000391076 69 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 AL033519.2-201ENST00000403958 392 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RPL23AP36-201ENST00000413895 458 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 AL590383.1-201ENST00000428602 75 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.638-201ENST00000459374 113 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RPL23AP45-201ENST00000476406 468 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RNA5SP367-201ENST00000516557 118 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 SNORD59.2-201ENST00000516873 68 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-612P-201ENST00000516909 102 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RNU2-31P-201ENST00000516954 155 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RNA5SP471-201ENST00000516971 106 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 CASP1P1-201ENST00000526345 212 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 AC027288.2-201ENST00000553028 243 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 HMGB1P14-201ENST00000557424 591 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 RPL23AP78-201ENST00000599928 470 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 AC004852.3-201ENST00000614131 326 ntBASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.5□□□□□ -1.85
SH3RF3Q8TEJ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-923P-201ENST00000364753 107 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-76P-201ENST00000384060 104 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.580-201ENST00000391004 95 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AL591043.1-201ENST00000432461 424 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC005002.2-201ENST00000438228 269 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 RNA5SP356-201ENST00000515972 94 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 SNORA31.1-201ENST00000515993 133 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 SNORA31.5-201ENST00000516190 133 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-927P-201ENST00000516199 100 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AL157871.3-201ENST00000557231 293 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC090617.3-201ENST00000573670 475 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AP000787.2-201ENST00000604432 568 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC005046.1-201ENST00000608515 625 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AL138880.2-201ENST00000616214 239 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 AC110774.1-201ENST00000623567 2018 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.49□□□□□ -1.85
SH3RF3Q8TEJ3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 UBE2L2-201ENST00000254302 429 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RNU5A-1-201ENST00000362698 116 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RNU6-318P-201ENST00000384283 103 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 SNORA36C-201ENST00000384289 132 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.568-201ENST00000384742 113 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RNU2-61P-201ENST00000411069 191 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 Y_RNA.629-201ENST00000411368 105 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 AC245291.1-201ENST00000419501 328 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RPL21P40-201ENST00000428586 483 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 HMGB1P27-201ENST00000431429 603 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 Z82188.1-201ENST00000436709 154 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 SNORD2.1-201ENST00000458762 69 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RPS26P21-201ENST00000475397 348 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RPS15AP34-201ENST00000487776 387 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 AC140059.1-201ENST00000489238 361 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 AC079600.2-201ENST00000550076 130 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 MIR4423-201ENST00000580922 80 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.48□□□□□ -1.85
SH3RF3Q8TEJ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms