Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 AC091932.3-201ENST00000624223 323 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 MIR6863-201ENST00000636112 90 ntBASIC1.33□□□□□ -2.2
LINC01560Q8TB33 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01560Q8TB33 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNU6-234P-201ENST00000365229 104 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 Y_RNA.378-201ENST00000365652 113 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 SNORA69-201ENST00000383895 132 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNU6-259P-201ENST00000383999 107 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNU6-38P-201ENST00000384085 107 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNU11-3P-201ENST00000391111 133 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 SNORA26.3-201ENST00000391119 136 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 POLHP1-201ENST00000411806 470 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AC078809.1-201ENST00000427601 140 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AMD1P1-201ENST00000457220 922 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 PPP1R2P5-201ENST00000457256 603 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNU7-138P-201ENST00000459479 64 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 HMGB3P17-201ENST00000504195 649 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RNA5SP401-201ENST00000515920 127 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AP005660.1-201ENST00000522972 293 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 CENPUP1-201ENST00000526649 1202 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AP005597.4-201ENST00000526762 229 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL161670.1-201ENST00000554348 137 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL109918.3-201ENST00000603072 338 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 RMST_6.1-201ENST00000611980 203 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 SNORA43.4-201ENST00000629559 138 ntBASIC1.32□□□□□ -2.2
LINC01560Q8TB33 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01560Q8TB33 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNU4-13P-201ENST00000364019 141 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 SNORA36A-201ENST00000384221 132 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MIR676-201ENST00000390702 67 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 SNORD37.1-201ENST00000390968 65 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNA5SP465-201ENST00000391195 109 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 CALM2P3-201ENST00000400429 449 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MTCYBP2-201ENST00000407745 171 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNA5SP201-201ENST00000410316 124 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MTND2P29-201ENST00000438595 412 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MTCO2P3-201ENST00000442543 421 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MTND2P22-201ENST00000444325 1033 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AC245102.2-201ENST00000448956 180 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNA5SP233-201ENST00000459153 113 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNU6-261P-201ENST00000459506 102 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNU6-189P-201ENST00000516120 101 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 RNU6-835P-201ENST00000516974 104 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 NBR2-204ENST00000587322 63 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AL356157.2-201ENST00000605122 111 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AL627230.6-201ENST00000611129 280 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AL773524.1-201ENST00000614065 229 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AC103705.1-201ENST00000619013 241 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 OR5AK4P-201ENST00000635912 903 ntBASIC1.31□□□□□ -2.2
LINC01560Q8TB33 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
LINC01560Q8TB33 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AC008555.8-201ENST00000623602 2168 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AC092268.1-201ENST00000342691 405 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 Y_RNA.99-201ENST00000363138 105 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 Y_RNA.167-201ENST00000363735 109 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 RNU6-1322P-201ENST00000364309 107 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 Y_RNA.269-201ENST00000364685 89 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 RNU4-66P-201ENST00000365199 138 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 RNU6-1042P-201ENST00000384204 107 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 Y_RNA.504-201ENST00000384481 104 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 MTCO3P40-201ENST00000392516 676 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 RNA5SP501-201ENST00000410990 112 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AP000275.1-201ENST00000411943 390 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AL158823.1-201ENST00000418441 478 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 HMGN2P18-201ENST00000450680 270 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AC132942.1-201ENST00000486753 483 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 RNU6-1069P-201ENST00000516612 133 ntBASIC1.3□□□□□ -2.2
LINC01560Q8TB33 AC243960.4-201ENST00000600532 288 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms