Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-507P-201ENST00000516045 100 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AC023824.2-201ENST00000566185 400 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL713866.2-201ENST00000603579 219 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL355297.2-201ENST00000604792 129 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AL356157.2-201ENST00000605122 111 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 AC063943.3-201ENST00000615562 356 ntBASIC2.7□□□□□ -1.98
USP38Q8NB14 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP38Q8NB14 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.7□□□□□ -1.98
USP38Q8NB14 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
USP38Q8NB14 Y_RNA.142-201ENST00000363491 102 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 U8.8-201ENST00000365399 135 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP38Q8NB14 RNU6-142P-201ENST00000384019 107 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 Y_RNA.473-201ENST00000384333 102 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 MIR548K-201ENST00000408406 116 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 AC078809.1-201ENST00000427601 140 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 MTATP6P23-201ENST00000440153 476 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 AC091951.2-201ENST00000500762 203 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 HMGB1P35-201ENST00000503360 598 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 Y_RNA.702-201ENST00000516843 96 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 RNU6-586P-201ENST00000517265 104 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.69□□□□□ -1.98
USP38Q8NB14 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.69□□□□□ -1.98
USP38Q8NB14 CBX3P7-201ENST00000532876 502 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
USP38Q8NB14 AL034555.1-201ENST00000604816 211 ntBASIC2.69□□□□□ -1.98
USP38Q8NB14 AC092268.1-201ENST00000342691 405 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 RNU6-1059P-201ENST00000363752 98 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 SNORA38-201ENST00000363946 132 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 RNU6-601P-201ENST00000384540 107 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 MIR524-201ENST00000385242 87 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 RN7SKP61-201ENST00000410642 295 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 RPL23AP95-201ENST00000426806 265 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 USP9YP30-201ENST00000430729 455 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AL133396.1-201ENST00000432048 687 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.68□□□□□ -1.98
USP38Q8NB14 DAP3P1-201ENST00000441522 278 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AL161788.1-201ENST00000441805 169 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC011753.1-201ENST00000451001 220 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 CYP2C59P-201ENST00000457790 269 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.68□□□□□ -1.98
USP38Q8NB14 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.68□□□□□ -1.98
USP38Q8NB14 MRPS36P4-201ENST00000534436 298 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.68□□□□□ -1.98
USP38Q8NB14 MIR4273-201ENST00000582824 84 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC078795.3-201ENST00000602913 472 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 Y_RNA.804-201ENST00000615262 101 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC009233.1-201ENST00000616477 371 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC008121.3-201ENST00000618726 433 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC092794.2-201ENST00000620933 563 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 MIR203B-201ENST00000636080 86 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 AC131280.1-202ENST00000624067 4211 ntBASIC2.68□□□□□ -1.98
USP38Q8NB14 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.67□□□□□ -1.98
USP38Q8NB14 MTND5P6-201ENST00000422338 1798 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 RNA5SP240-201ENST00000365355 128 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 RNU6-968P-201ENST00000384076 107 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 SNORA64-201ENST00000384674 134 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
USP38Q8NB14 HMGB3P2-201ENST00000411913 584 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 EIF1AXP1-201ENST00000419267 435 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 AC093019.1-201ENST00000443135 252 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 FO393415.2-201ENST00000480085 343 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.67□□□□□ -1.98
USP38Q8NB14 MIR3136-201ENST00000583498 78 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 AC103810.6-201ENST00000606708 136 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 AC104260.1-201ENST00000616660 539 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 AL449363.1-201ENST00000617815 186 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
USP38Q8NB14 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.67□□□□□ -1.98
USP38Q8NB14 AP000560.1-201ENST00000624150 1937 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP38Q8NB14 Y_RNA.70-201ENST00000362886 110 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 RNU6-1009P-201ENST00000390996 107 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 RPL23AP42-201ENST00000471152 471 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.66□□□□□ -1.98
USP38Q8NB14 AC022447.4-201ENST00000504053 364 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 RNU6-875P-201ENST00000516488 106 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 RNA5SP82-201ENST00000516707 92 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 RNA5SP402-201ENST00000517148 110 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.66□□□□□ -1.98
USP38Q8NB14 AC021269.2-201ENST00000532318 330 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 AC109446.1-201ENST00000566172 220 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 HMGB1P24-202ENST00000615653 685 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 SNORA43.4-201ENST00000629559 138 ntBASIC2.66□□□□□ -1.98
USP38Q8NB14 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP38Q8NB14 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP38Q8NB14 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.98
USP38Q8NB14 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
USP38Q8NB14 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.98
USP38Q8NB14 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
USP38Q8NB14 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
USP38Q8NB14 AC233981.2-201ENST00000611524 1614 ntBASIC2.65□□□□□ -1.98
USP38Q8NB14 Y_RNA.2-201ENST00000362330 96 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 Y_RNA.339-201ENST00000365325 102 ntBASIC2.65□□□□□ -1.99
USP38Q8NB14 Y_RNA.356-201ENST00000365475 113 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms