Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC008555.8-201ENST00000623602 2168 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 SNORD115-3-201ENST00000363100 82 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNU6-105P-201ENST00000363909 104 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 MIR544A-201ENST00000384855 91 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 MIR548K-201ENST00000408406 116 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AC022028.1-201ENST00000412054 408 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL645568.3-201ENST00000433683 316 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 HMGB1P18-201ENST00000438801 619 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL031659.1-201ENST00000447075 539 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 MTCO1P29-201ENST00000496868 288 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AC103851.1-201ENST00000506833 274 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNU6-377P-201ENST00000515965 102 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNU1-41P-201ENST00000516161 162 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNU1-48P-201ENST00000516400 162 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNU6-1332P-201ENST00000516666 104 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNU6-566P-201ENST00000516790 107 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 RNA5SP454-201ENST00000517231 127 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AP005639.2-201ENST00000527592 928 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AC009314.1-201ENST00000603871 304 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL159153.1-201ENST00000619688 317 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 AC097372.5-201ENST00000623665 376 ntBASIC2.11□□□□□ -2.07
RTL3Q8N8U3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.11□□□□□ -2.07
RTL3Q8N8U3 MTND4P12-201ENST00000498999 1377 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.1□□□□□ -2.07
RTL3Q8N8U3 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.70-201ENST00000362886 110 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RTL3Q8N8U3 RNU6-214P-201ENST00000384130 107 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 RNU6-95P-201ENST00000384697 107 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 MIR29C-201ENST00000385231 88 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 SNAP23P1-201ENST00000433229 246 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 MTND4LP16-201ENST00000440828 295 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AC007969.2-201ENST00000441891 191 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AL353752.1-201ENST00000454946 260 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 MTND1P11-201ENST00000456661 876 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 RPS29P21-201ENST00000496272 170 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AC115990.1-201ENST00000526957 301 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 AC026371.1-201ENST00000551867 419 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 TPTEP1-208ENST00000636884 213 ntBASIC2.1□□□□□ -2.07
RTL3Q8N8U3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RTL3Q8N8U3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 RNU6-562P-201ENST00000362731 107 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 RNU6-944P-201ENST00000364023 107 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 RNU6-336P-201ENST00000364891 107 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 RNU6-1009P-201ENST00000390996 107 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 NCOR1P3-201ENST00000420479 303 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AL590632.1-201ENST00000424289 371 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AL021397.1-201ENST00000451806 248 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 MTND5P5-201ENST00000503764 376 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 RNU6-965P-201ENST00000516721 96 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 MIR514B-201ENST00000516774 80 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AC018630.3-201ENST00000542637 96 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 CPDP1-201ENST00000579660 283 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AL117336.2-201ENST00000602435 335 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 AC005034.5-201ENST00000604219 466 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.09□□□□□ -2.07
RTL3Q8N8U3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RTL3Q8N8U3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNU6-428P-201ENST00000362942 107 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNU6-827P-201ENST00000365553 106 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 SNORA46.1-201ENST00000391069 153 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AC096920.1-201ENST00000423991 241 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 RPS15AP10-201ENST00000432472 382 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 SNRPEP8-201ENST00000442866 260 ntBASIC2.08□□□□□ -2.08
RTL3Q8N8U3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms