Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 UBA52P6-201ENST00000399822 382 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AL133475.1-201ENST00000404414 305 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 MIR1252-201ENST00000408861 65 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 MTCO3P19-201ENST00000415864 321 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC096649.2-201ENST00000416186 393 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 RPL23AP95-201ENST00000426806 265 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 IPO7P1-201ENST00000442031 636 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC009296.1-201ENST00000443146 155 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 S100A11P2-201ENST00000467589 312 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC010655.3-201ENST00000478818 450 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC093852.1-201ENST00000503587 266 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 SNORD19.2-201ENST00000516978 73 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 Y_RNA.715-201ENST00000517082 110 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 MIR4325-201ENST00000583049 90 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC008739.2-201ENST00000597006 317 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 RPL23AP78-201ENST00000599928 470 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AL355877.2-201ENST00000603670 358 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 AL355297.3-201ENST00000604082 446 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 UCA1.1-201ENST00000620952 75 ntBASIC2.53□□□□□ -2
CLIP4Q8N3C7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLIP4Q8N3C7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
CLIP4Q8N3C7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.152-201ENST00000363578 100 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 RNU6-622P-201ENST00000384272 103 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 SNORA51.11-201ENST00000384442 131 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 MIR32-201ENST00000384965 70 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 GPM6BP3-201ENST00000442797 145 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AC107626.1-201ENST00000471084 183 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 MRPS35P2-201ENST00000508242 191 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 MRPS36P2-201ENST00000512569 299 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 RNU6-911P-201ENST00000516523 104 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AC131281.1-201ENST00000522984 164 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 MIR3200-201ENST00000580767 85 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AC090897.2-201ENST00000581715 130 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 RPS29P30-201ENST00000600975 111 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 PRR13P7-201ENST00000605538 430 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 AL021879.1-201ENST00000611756 288 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 SCARNA4-201ENST00000629045 128 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 SNORA43.4-201ENST00000629559 138 ntBASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.52□□□□□ -2.01
CLIP4Q8N3C7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.210-201ENST00000364161 110 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 RNU6-487P-201ENST00000365430 104 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 RNU6-708P-201ENST00000384217 107 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.526-201ENST00000384572 110 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 SNORA44-201ENST00000384584 132 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.574-201ENST00000384766 95 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 RNU6-1109P-201ENST00000391187 107 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 MIR1289-1-201ENST00000408836 144 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AC087477.1-201ENST00000465747 340 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AF186996.7-201ENST00000492781 209 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AC016632.1-201ENST00000503994 196 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 RNU5B-3P-201ENST00000516601 115 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AC091144.1-201ENST00000519573 138 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AC011471.1-201ENST00000585766 187 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
CLIP4Q8N3C7 AP000560.1-201ENST00000624150 1937 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 RNU6-525P-201ENST00000363685 104 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 RNU6-748P-201ENST00000384648 107 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.551-201ENST00000384661 102 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 MIR1302-3-201ENST00000408128 138 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC078809.1-201ENST00000427601 140 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC244670.1-201ENST00000436879 112 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC004383.1-201ENST00000438135 289 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AL441985.1-201ENST00000457727 251 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 ANXA2P1-201ENST00000505539 926 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms