Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNU2-25P-201ENST00000411041 191 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFX6Q8HWS3 RPL23AP95-201ENST00000426806 265 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX6Q8HWS3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX6Q8HWS3 CHEK2P4-201ENST00000450340 246 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AL353752.1-201ENST00000454946 260 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 SNRPGP7-201ENST00000469016 106 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 RPL31P41-201ENST00000477967 372 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AC104564.1-201ENST00000493028 407 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 GZMAP1-201ENST00000503054 631 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX6Q8HWS3 RNU6-408P-201ENST00000515910 100 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 RNU6-388P-201ENST00000517012 105 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 RNU6-389P-201ENST00000517048 105 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AC005357.1-201ENST00000588399 301 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AL391813.1-201ENST00000603098 260 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 AL355877.2-201ENST00000603670 358 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 RNU6-91P-201ENST00000607774 107 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 U2.1-201ENST00000618978 145 ntBASIC2.82□□□□□ -1.96
RFX6Q8HWS3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFX6Q8HWS3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 RNA5SP387-201ENST00000364226 106 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 Y_RNA.396-201ENST00000383949 103 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 MTCYBP2-201ENST00000407745 171 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 MIR548I3-201ENST00000408378 149 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 MIR548I1-201ENST00000408810 149 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC092423.1-201ENST00000430165 186 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC087499.2-201ENST00000432861 149 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 RPL39P29-201ENST00000447779 157 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC091874.1-201ENST00000511402 339 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC022616.4-201ENST00000522985 181 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 HSPE1P4-201ENST00000550617 308 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AL138825.1-201ENST00000618587 192 ntBASIC2.81□□□□□ -1.96
RFX6Q8HWS3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.81□□□□□ -1.96
RFX6Q8HWS3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFX6Q8HWS3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFX6Q8HWS3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX6Q8HWS3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RNU6-874P-201ENST00000362390 105 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RNU4-9P-201ENST00000364951 139 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RPL21P1-201ENST00000399532 476 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RNA5SP494-201ENST00000410653 129 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AL353705.4-201ENST00000449661 238 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX6Q8HWS3 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RPL30P12-201ENST00000474666 353 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC016632.1-201ENST00000503994 196 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RNU7-175P-201ENST00000515915 61 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 SNORA70.24-201ENST00000517233 118 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC144568.1-201ENST00000520139 137 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 MRPS36P4-201ENST00000534436 298 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC023157.2-201ENST00000540596 141 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC016256.1-201ENST00000547971 354 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC007375.1-201ENST00000554513 578 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC105137.2-201ENST00000569073 466 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC100812.1-201ENST00000607622 580 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC096772.1-201ENST00000609146 564 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 MIR1244-1-201ENST00000612829 85 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 MIR8062-201ENST00000621515 85 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 MIR1244-3-201ENST00000635744 85 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 MIR1244-2-201ENST00000636449 85 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 MIR1244-4-202ENST00000636813 85 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 AC002543.1-201ENST00000299783 1954 ntBASIC2.8□□□□□ -1.96
RFX6Q8HWS3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
RFX6Q8HWS3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX6Q8HWS3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
RFX6Q8HWS3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFX6Q8HWS3 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
RFX6Q8HWS3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFX6Q8HWS3 Y_RNA.447-201ENST00000384184 113 ntBASIC2.79□□□□□ -1.96
RFX6Q8HWS3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.79□□□□□ -1.96
RFX6Q8HWS3 MIR1252-201ENST00000408861 65 ntBASIC2.79□□□□□ -1.96
RFX6Q8HWS3 RN7SKP61-201ENST00000410642 295 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms