Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AL450472.1-202ENST00000637286 180 ntBASIC2.2□□□□□ -2.06
PRPF39Q86UA1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PRPF39Q86UA1 AC008555.8-201ENST00000623602 2168 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 RNY4P14-201ENST00000363656 96 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 RNU6-968P-201ENST00000384076 107 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 RNU6-160P-201ENST00000384591 107 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PRPF39Q86UA1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PRPF39Q86UA1 VN1R36P-201ENST00000414936 291 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 MTCO1P21-201ENST00000416634 589 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 SNRPEP10-201ENST00000420249 274 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC096920.1-201ENST00000423991 241 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 SRIP2-201ENST00000428470 166 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 HMGN2P3-201ENST00000433603 273 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 HMGN2P5-201ENST00000436882 273 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.19□□□□□ -2.06
PRPF39Q86UA1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
PRPF39Q86UA1 snoU13.6-201ENST00000458785 104 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC007547.1-201ENST00000462177 490 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.19□□□□□ -2.06
PRPF39Q86UA1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC016256.1-201ENST00000547971 354 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 TPRKBP2-201ENST00000565969 475 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 MIR4524B-201ENST00000581569 115 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 CYP2C61P-201ENST00000604072 290 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 U4.5-201ENST00000617137 123 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC024614.3-201ENST00000637860 256 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PRPF39Q86UA1 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
PRPF39Q86UA1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RNA5SP432-201ENST00000362480 116 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RNU6-1026P-201ENST00000384465 108 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 SNORA64-201ENST00000384674 134 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 MIR597-201ENST00000384968 97 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRPF39Q86UA1 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RNA5SP494-201ENST00000410653 129 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RNU2-41P-201ENST00000410991 178 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.18□□□□□ -2.06
PRPF39Q86UA1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.18□□□□□ -2.06
PRPF39Q86UA1 MTND1P34-201ENST00000438556 671 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 RPL23AP7-203ENST00000449021 469 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 AC243960.4-201ENST00000600532 288 ntBASIC2.18□□□□□ -2.06
PRPF39Q86UA1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
PRPF39Q86UA1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 RNU6-23P-201ENST00000363283 107 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 RNA5SP160-201ENST00000364866 120 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.453-201ENST00000384223 109 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 AC009161.1-201ENST00000417306 376 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 RNU7-14P-201ENST00000459331 62 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 AC104458.1-201ENST00000608243 463 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 MIR8076-201ENST00000611401 83 ntBASIC2.17□□□□□ -2.06
PRPF39Q86UA1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRPF39Q86UA1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRPF39Q86UA1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.295-201ENST00000364918 102 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 SNORA29-201ENST00000384183 140 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 C8orf59P1-201ENST00000429930 303 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRPF39Q86UA1 AL353689.1-201ENST00000438895 199 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 RPL23AP6-201ENST00000446637 472 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 RNA5SP57-201ENST00000459463 123 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 AC091435.1-201ENST00000505442 584 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 ANP32BP3-201ENST00000559213 706 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 MIR3976-201ENST00000606807 139 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 RMST_3.1-201ENST00000611651 109 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 AC005520.5-201ENST00000613926 164 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.16□□□□□ -2.06
PRPF39Q86UA1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.06
PRPF39Q86UA1 MTND4P1-201ENST00000457501 1466 ntBASIC2.15□□□□□ -2.06
PRPF39Q86UA1 Y_RNA.89-201ENST00000363031 102 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AL079342.1-201ENST00000401460 267 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 MIR1289-2-201ENST00000408360 111 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 MIR1283-2-201ENST00000408621 87 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 ZNF885P-201ENST00000420174 1098 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 USP9YP28-201ENST00000435142 589 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 AL353572.1-201ENST00000442490 417 ntBASIC2.15□□□□□ -2.07
PRPF39Q86UA1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.15□□□□□ -2.07
PRPF39Q86UA1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms