Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-1338P-201ENST00000516328 91 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 SNORA31.16-201ENST00000516773 139 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 UBL5P4-201ENST00000562584 236 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 AL162713.1-201ENST00000604480 262 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 AC011476.5-201ENST00000615594 130 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 AL513302.2-201ENST00000562313 1842 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 Z83843.1-201ENST00000604070 3685 ntBASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RUFY4Q6ZNE9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 RNA5SP361-201ENST00000362686 118 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 RNU4-90P-201ENST00000362773 141 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 SNORD113-8-201ENST00000363497 74 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 Y_RNA.230-201ENST00000364348 109 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 Y_RNA.237-201ENST00000364439 102 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 RNU6-805P-201ENST00000365643 106 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 RNU6-937P-201ENST00000384325 106 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 AC005002.2-201ENST00000438228 269 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 AC007395.1-201ENST00000451333 677 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 snoU13.6-201ENST00000458785 104 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 AL049873.1-201ENST00000480540 376 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 GZMAP1-201ENST00000503054 631 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 SEPT14P8-201ENST00000508026 178 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 RNU6-496P-201ENST00000516145 99 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 MIR4423-201ENST00000580922 80 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 SNORD113-5-201ENST00000607261 78 ntBASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RUFY4Q6ZNE9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 SNORD58.1-201ENST00000391313 66 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 RNU6-1001P-201ENST00000411265 100 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 AP001486.1-201ENST00000463339 476 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 RPL26P26-201ENST00000480251 434 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 AC011373.1-201ENST00000607270 237 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 AC010999.1-201ENST00000611856 324 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 AC022149.2-201ENST00000621061 203 ntBASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.72□□□□□ -1.81
RUFY4Q6ZNE9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.71□□□□□ -1.81
RUFY4Q6ZNE9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RUFY4Q6ZNE9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-290P-201ENST00000365212 101 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-926P-201ENST00000384075 107 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.477-201ENST00000384352 108 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.595-201ENST00000410403 105 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AC074133.1-201ENST00000515696 183 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.673-201ENST00000516306 88 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 DEFB108E-201ENST00000524692 240 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AL034555.1-201ENST00000604816 211 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 BX284668.6-201ENST00000606899 438 ntBASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RUFY4Q6ZNE9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-873P-201ENST00000363833 107 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.541-201ENST00000384640 113 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 MT-TR-201ENST00000387439 65 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 SETP5-201ENST00000437270 562 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC073901.1-201ENST00000462471 408 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.683-201ENST00000516508 93 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 SNRPGP20-201ENST00000604477 205 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC073657.2-201ENST00000605661 303 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 AC127459.3-201ENST00000624328 466 ntBASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.7□□□□□ -1.82
RUFY4Q6ZNE9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 RNU6-529P-201ENST00000363383 104 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 MIR487A-201ENST00000385009 80 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 AL033519.2-201ENST00000403958 392 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 RNA5SP293-201ENST00000410527 113 ntBASIC3.69□□□□□ -1.82
RUFY4Q6ZNE9 Y_RNA.602-201ENST00000410535 92 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms