Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AC096649.2-201ENST00000416186 393 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 RPL30P14-201ENST00000482744 348 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AC011471.1-201ENST00000585766 187 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AC006380.1-201ENST00000603598 186 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AL137843.1-201ENST00000605078 385 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 SNORA62.6-201ENST00000606322 83 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AC018692.3-201ENST00000623929 123 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 AL513302.2-201ENST00000562313 1842 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.272-201ENST00000364696 102 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 AL357075.1-201ENST00000404107 726 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 RNU2-2P-201ENST00000410396 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 CYCSP48-201ENST00000417124 323 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 SNRPGP5-201ENST00000456003 220 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 AC140059.1-201ENST00000489238 361 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 MIR2276-201ENST00000516886 89 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 RPS15AP11-201ENST00000594193 385 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 RNU2-4P-201ENST00000606190 192 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.15-201ENST00000611544 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.16-201ENST00000613119 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.12-201ENST00000613778 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.9-201ENST00000615427 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.11-201ENST00000616345 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.2-201ENST00000616535 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 MIR6076-201ENST00000617521 113 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.3-201ENST00000617785 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.19-201ENST00000618602 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 RNU2-1-201ENST00000618664 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.6-201ENST00000619225 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.5-201ENST00000619465 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 U2.10-201ENST00000620268 191 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF111Q6ZNA4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 RNU6-748P-201ENST00000384648 107 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 MIR554-201ENST00000384874 96 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 MIR186-201ENST00000384988 86 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 SNORA40.19-201ENST00000390846 128 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 RNA5SP424-201ENST00000390988 115 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC027124.2-201ENST00000428249 105 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 SUMO2P18-201ENST00000518873 252 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AP000867.2-201ENST00000532468 320 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AL133393.1-201ENST00000603277 287 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC069200.1-201ENST00000609511 323 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 AC002076.2-201ENST00000617362 122 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.49□□□□□ -1.85
RNF111Q6ZNA4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.7-201ENST00000362352 102 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RNU6-454P-201ENST00000364292 107 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 SNORD87-201ENST00000364849 89 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RNU6-81P-201ENST00000365608 104 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 HSPE1P26-201ENST00000405341 275 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 U3.40-201ENST00000408706 208 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RNA5SP293-201ENST00000410527 113 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AC004866.1-201ENST00000411748 78 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AL714022.1-201ENST00000439897 151 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AL133162.1-201ENST00000463228 453 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RPL31P41-201ENST00000477967 372 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RNU6-436P-201ENST00000516171 114 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 SNORD19.2-201ENST00000516978 73 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 RNU2-12P-201ENST00000517216 168 ntBASIC3.48□□□□□ -1.85
RNF111Q6ZNA4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms