Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-835P-201ENST00000516974 104 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC015712.3-201ENST00000559380 164 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 VN1R80P-201ENST00000597126 338 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 AP000654.2-201ENST00000605633 586 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 AC124864.2-201ENST00000624736 186 ntBASIC1.66□□□□□ -2.14
ATL3Q6DD88 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.66□□□□□ -2.14
ATL3Q6DD88 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
ATL3Q6DD88 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
ATL3Q6DD88 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AL606923.1-201ENST00000406616 190 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AP000275.1-201ENST00000411943 390 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AL590135.1-201ENST00000422215 156 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC019205.3-201ENST00000424573 156 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC016700.2-201ENST00000446011 156 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 Z83846.1-201ENST00000446798 265 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 TPTE2P5-203ENST00000458118 728 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 RNU7-138P-201ENST00000459479 64 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC007547.1-201ENST00000462177 490 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC015911.1-201ENST00000495111 156 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.65□□□□□ -2.15
ATL3Q6DD88 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.65□□□□□ -2.15
ATL3Q6DD88 MIR449C-201ENST00000516047 92 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.65□□□□□ -2.15
ATL3Q6DD88 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
ATL3Q6DD88 HSPE1P4-201ENST00000550617 308 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 SNORA43.4-201ENST00000629559 138 ntBASIC1.65□□□□□ -2.15
ATL3Q6DD88 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ATL3Q6DD88 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
ATL3Q6DD88 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ATL3Q6DD88 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 RNU6-743P-201ENST00000364151 106 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 RNU6-1322P-201ENST00000364309 107 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ATL3Q6DD88 SNORA69-201ENST00000383895 132 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 RNA5SP219-201ENST00000390940 113 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.64□□□□□ -2.15
ATL3Q6DD88 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.64□□□□□ -2.15
ATL3Q6DD88 AL121601.2-201ENST00000438019 707 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.64□□□□□ -2.15
ATL3Q6DD88 HMGN2P18-201ENST00000450680 270 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 FO393415.2-201ENST00000480085 343 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 AC008628.2-201ENST00000502605 298 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 AC096745.1-201ENST00000509945 370 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 CENPUP1-201ENST00000526649 1202 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 NBR2-204ENST00000587322 63 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 AC078795.3-201ENST00000602913 472 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 PCGEM1.1-201ENST00000613431 131 ntBASIC1.64□□□□□ -2.15
ATL3Q6DD88 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
ATL3Q6DD88 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ATL3Q6DD88 AC092268.1-201ENST00000342691 405 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 SNORD114-6-201ENST00000364393 72 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU6-60P-201ENST00000364792 103 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 Y_RNA.332-201ENST00000365271 113 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU4-20P-201ENST00000365601 151 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 Y_RNA.378-201ENST00000365652 113 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU6-26P-201ENST00000383985 107 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU6-160P-201ENST00000384591 107 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 SNORD73A-201ENST00000386062 65 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 SNORA67.5-201ENST00000391036 107 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 CALM2P3-201ENST00000400429 449 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 AL357139.1-201ENST00000407792 426 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU6-648P-201ENST00000410190 107 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.63□□□□□ -2.15
ATL3Q6DD88 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.63□□□□□ -2.15
ATL3Q6DD88 AL035666.1-201ENST00000446195 348 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNA5SP57-201ENST00000459463 123 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 SNRPGP7-201ENST00000469016 106 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU6-189P-201ENST00000516120 101 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 RNU6-1038P-201ENST00000516516 104 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 AC005520.5-201ENST00000613926 164 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 MIR7974-201ENST00000615835 79 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 MIR6863-201ENST00000636112 90 ntBASIC1.63□□□□□ -2.15
ATL3Q6DD88 MIR340-201ENST00000362125 95 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 Y_RNA.140-201ENST00000363474 103 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 RNU4-13P-201ENST00000364019 141 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 Y_RNA.338-201ENST00000365320 114 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 Y_RNA.481-201ENST00000384373 102 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 SNORA48.1-201ENST00000390879 135 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 MTCO3P40-201ENST00000392516 676 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 MIR1289-2-201ENST00000408360 111 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 RNA5SP501-201ENST00000410990 112 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ATL3Q6DD88 CYCSP49-201ENST00000420810 319 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.62□□□□□ -2.15
ATL3Q6DD88 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 RPS29P27-201ENST00000463711 170 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms