Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AP000654.2-201ENST00000605633 586 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 AC073869.6-201ENST00000640656 341 ntBASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC30Q5VVM6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 Y_RNA.295-201ENST00000364918 102 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 VN1R36P-201ENST00000414936 291 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 C8orf59P1-201ENST00000429930 303 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC116337.1-201ENST00000509680 687 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC096745.1-201ENST00000509945 370 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 RPL39P5-202ENST00000512505 151 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 MIR514B-201ENST00000516774 80 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC068790.6-201ENST00000602558 258 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 RPL17P51-201ENST00000605218 238 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 CTHRC1P1-201ENST00000605383 469 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 MIR8076-201ENST00000611401 83 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 AC022202.1-201ENST00000613515 211 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 MIR7843-201ENST00000622274 79 ntBASIC2.44□□□□□ -2.02
CCDC30Q5VVM6 U3.9-201ENST00000363823 204 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 Y_RNA.414-201ENST00000384011 101 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 MIR583-201ENST00000384846 75 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 RNA5SP338-201ENST00000410495 85 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 RNU6-325P-201ENST00000411132 105 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC009161.1-201ENST00000417306 376 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AL445685.2-201ENST00000422551 342 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC012306.1-201ENST00000423267 114 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 RPL23AP42-201ENST00000471152 471 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC055731.1-201ENST00000474387 401 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 PTP4A1P4-201ENST00000512479 322 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 RNU6-295P-201ENST00000516901 104 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 MIR4448-201ENST00000584360 86 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 AL359314.1-201ENST00000616913 261 ntBASIC2.43□□□□□ -2.02
CCDC30Q5VVM6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 MTND4P1-201ENST00000457501 1466 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 RNU6-26P-201ENST00000383985 107 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 RNU6-933P-201ENST00000384424 107 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 SNORD115-47-201ENST00000391226 86 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 RNU6-192P-201ENST00000391253 100 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AL355497.1-201ENST00000406262 551 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 RNU2-20P-201ENST00000410425 191 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 MTND3P9-201ENST00000429526 346 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 USP9YP28-201ENST00000435142 589 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AC011352.1-201ENST00000512300 793 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AL138726.1-201ENST00000614873 333 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 MIR1248-201ENST00000629190 106 ntBASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC30Q5VVM6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 MIR518A2-201ENST00000384966 87 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 SNORA40.18-201ENST00000391200 128 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 AL357139.1-201ENST00000407792 426 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 MIR1277-201ENST00000408536 78 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 RNU2-40P-201ENST00000410833 196 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 FCF1P9-201ENST00000412546 282 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 EIF1P1-201ENST00000421436 341 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 RNU6-256P-201ENST00000516747 97 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 AC007229.1-201ENST00000590455 412 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 AC080078.2-201ENST00000603766 501 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 AL133215.3-201ENST00000609801 448 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 MIR6845-201ENST00000613182 61 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCDC30Q5VVM6 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.02
CCDC30Q5VVM6 Y_RNA.212-201ENST00000364177 102 ntBASIC2.4□□□□□ -2.03
CCDC30Q5VVM6 SNORD14D-201ENST00000384390 87 ntBASIC2.4□□□□□ -2.03
CCDC30Q5VVM6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms