Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU1-117P-201ENST00000517041 158 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 DNAJC19P2-201ENST00000593340 302 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 AL034555.1-201ENST00000604816 211 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 SNORA62.6-201ENST00000606322 83 ntBASIC4.51□□□□□ -1.69
RNF20Q5VTR2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RNF20Q5VTR2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 AC004944.1-201ENST00000517807 3059 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 RNU6-199P-201ENST00000362954 107 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 SNORA8.3-201ENST00000384679 139 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 MIR626-201ENST00000385032 94 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 RNA5SP424-201ENST00000390988 115 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 AC004866.1-201ENST00000411748 78 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 AC027124.2-201ENST00000428249 105 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 SNRPGP5-201ENST00000456003 220 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 RNA5SP310-201ENST00000459084 116 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 AC006445.2-201ENST00000510061 472 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 RNU6-1007P-201ENST00000516586 107 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 RNU6-453P-201ENST00000516819 85 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 AL110115.1-201ENST00000614396 364 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 MIR6875-201ENST00000617506 72 ntBASIC4.5□□□□□ -1.69
RNF20Q5VTR2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF20Q5VTR2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 RNU6-529P-201ENST00000363383 104 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 RNU6-899P-201ENST00000363947 107 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 SNORD115-30-201ENST00000364117 82 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 AC107626.1-201ENST00000471084 183 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 SCARNA8-201ENST00000515924 131 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 SNORA70.14-201ENST00000516205 110 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 AC007496.3-201ENST00000624987 3443 ntBASIC4.49□□□□□ -1.69
RNF20Q5VTR2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF20Q5VTR2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.542-201ENST00000384641 111 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC004386.2-201ENST00000441858 148 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 RN7SL132P-201ENST00000478131 296 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 RN7SKP83-201ENST00000516512 178 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC109810.1-201ENST00000534066 224 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AL354798.1-201ENST00000622505 329 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AL391516.1-201ENST00000554380 2449 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC010733.2-201ENST00000589496 5702 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AL672296.1-201ENST00000427780 2158 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
RNF20Q5VTR2 AC006504.1-201ENST00000562493 3666 ntBASIC4.48□□□□□ -1.69
RNF20Q5VTR2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SNORD116-14-201ENST00000383894 92 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SNORD116-17-201ENST00000383929 92 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.420-201ENST00000384043 110 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SNORA72.4-201ENST00000384174 132 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SNORD116-15-201ENST00000384445 92 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SNORD116-19-201ENST00000384729 92 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 AC006461.1-201ENST00000412637 326 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 AC004975.1-201ENST00000428733 208 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 AC245047.8-201ENST00000456455 284 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 RPL23AP70-201ENST00000483361 460 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 RNU6-919P-201ENST00000516731 104 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SCARNA14-201ENST00000516903 136 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SNORD11B-201ENST00000607707 90 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 PCGEM1.1-201ENST00000613431 131 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.802-201ENST00000614892 130 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 AC008873.1-201ENST00000625051 138 ntBASIC4.47□□□□□ -1.69
RNF20Q5VTR2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RNF20Q5VTR2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.46□□□□□ -1.69
RNF20Q5VTR2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.46□□□□□ -1.69
RNF20Q5VTR2 Y_RNA.40-201ENST00000362645 93 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 RNU6-855P-201ENST00000410395 104 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AC074290.1-201ENST00000448883 135 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms