| CRY2 | Q49AN0 | Y_RNA.167-201 | ENST00000363735 | 109 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORD113-7-201 | ENST00000363762 | 77 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-1317P-201 | ENST00000364582 | 104 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | GSTA3-202 | ENST00000370968 | 775 nt | TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-933P-201 | ENST00000384424 | 107 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | FGF7P8-201 | ENST00000402994 | 292 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-373P-201 | ENST00000411247 | 98 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | LINC02541-201 | ENST00000427157 | 327 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MTND3P9-201 | ENST00000429526 | 346 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AMD1P1-201 | ENST00000457220 | 922 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC091874.1-201 | ENST00000511402 | 339 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC092436.3-201 | ENST00000511788 | 257 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-567P-201 | ENST00000516746 | 107 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC233702.2-202 | ENST00000562547 | 291 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | LINC02112-205 | ENST00000606744 | 236 nt | TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC068944.2-201 | ENST00000610373 | 403 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | ZBED5-202 | ENST00000432999 | 2741 nt | APPRIS P1 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | ENAM-201 | ENST00000396073 | 5679 nt | APPRIS P1 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-1252P-201 | ENST00000363054 | 104 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU6-254P-201 | ENST00000363377 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.453-201 | ENST00000384223 | 109 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA40.19-201 | ENST00000390846 | 128 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL360091.2-201 | ENST00000446847 | 650 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC055764.1-201 | ENST00000454526 | 473 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC116563.1-201 | ENST00000505454 | 396 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC010457.1-201 | ENST00000510469 | 458 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA31.11-201 | ENST00000516528 | 139 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC021785.1-201 | ENST00000520780 | 453 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC109446.1-201 | ENST00000566172 | 220 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC100830.2-201 | ENST00000581636 | 240 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AP005057.1-201 | ENST00000583827 | 574 nt | TSL 4 BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC007229.1-201 | ENST00000590455 | 412 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC078899.2-201 | ENST00000595282 | 212 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AP000654.2-201 | ENST00000605633 | 586 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC024614.3-201 | ENST00000637860 | 256 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC068137.4-201 | ENST00000638485 | 296 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | TBL1XR1-208 | ENST00000430069 | 7948 nt | APPRIS P1 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | GLMN-201 | ENST00000370360 | 1995 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL161668.1-201 | ENST00000320322 | 358 nt | TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.256-201 | ENST00000364594 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA46.1-201 | ENST00000391069 | 153 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA12-201 | ENST00000391162 | 147 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC093382.1-201 | ENST00000413311 | 379 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | C8orf59P1-201 | ENST00000429930 | 303 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | PRELID3BP1-201 | ENST00000457142 | 540 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC007547.1-201 | ENST00000462177 | 490 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | HMGN2P26-201 | ENST00000463169 | 339 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC132942.1-201 | ENST00000486753 | 483 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | Y_RNA.665-201 | ENST00000516177 | 98 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | SCOCP1-201 | ENST00000554676 | 349 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | LINC02301-203 | ENST00000555798 | 789 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC078795.3-201 | ENST00000602913 | 472 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL359821.1-201 | ENST00000605519 | 182 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AL132822.1-201 | ENST00000617063 | 513 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | UHRF1BP1L-203 | ENST00000545232 | 4088 nt | TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | N4BP2L2-205 | ENST00000446957 | 2071 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | AC005336.3-201 | ENST00000623833 | 2679 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| CRY2 | Q49AN0 | COMMD6-201 | ENST00000355801 | 486 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | Y_RNA.6-201 | ENST00000362350 | 114 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | Y_RNA.89-201 | ENST00000363031 | 102 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | Y_RNA.295-201 | ENST00000364918 | 102 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | RNU6-128P-201 | ENST00000383976 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | Y_RNA.530-201 | ENST00000384587 | 101 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MIR144-201 | ENST00000384886 | 86 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | SNRPG-202 | ENST00000413456 | 398 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | AL445259.1-203 | ENST00000427828 | 251 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | SNRPG-205 | ENST00000449935 | 428 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | SPIN4-AS1-201 | ENST00000451979 | 426 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | AC079804.2-201 | ENST00000490376 | 200 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MTCO1P29-201 | ENST00000496868 | 288 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | TRBVA-201 | ENST00000498804 | 316 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | AC096736.2-201 | ENST00000507972 | 175 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | PWRN1-203 | ENST00000564898 | 389 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | Y_RNA.100-201 | ENST00000363141 | 102 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | U3.9-201 | ENST00000363823 | 204 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | BTLA-202 | ENST00000383680 | 726 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MIR521-1-201 | ENST00000384902 | 87 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | SNORD115-47-201 | ENST00000391226 | 86 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | HMGN2P39-201 | ENST00000398005 | 273 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MTCYBP2-201 | ENST00000407745 | 171 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MIR1287-201 | ENST00000408492 | 90 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | RNU6-325P-201 | ENST00000411132 | 105 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | VN1R36P-201 | ENST00000414936 | 291 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | LINC01675-201 | ENST00000426519 | 701 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | AL603839.2-201 | ENST00000437060 | 546 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | PTP4A1P4-201 | ENST00000512479 | 322 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MIR449C-201 | ENST00000516047 | 92 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | MTND1P5-201 | ENST00000517906 | 940 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| CRY2 | Q49AN0 | AP003123.1-201 | ENST00000526041 | 333 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |