Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN1Q16799 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN1Q16799 RNU6-151P-201ENST00000364158 107 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 Y_RNA.261-201ENST00000364631 102 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 RNU6-283P-201ENST00000364788 107 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN1Q16799 U8.19-201ENST00000459095 133 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 RPL31P41-201ENST00000477967 372 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN1Q16799 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN1Q16799 RNU6-426P-201ENST00000516464 97 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 AC023632.4-201ENST00000517783 191 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 TGIF1P1-201ENST00000558095 802 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 Y_RNA.778-201ENST00000620203 90 ntBASIC4.21□□□□□ -1.74
RTN1Q16799 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN1Q16799 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN1Q16799 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN1Q16799 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN1Q16799 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN1Q16799 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN1Q16799 SNORD9-201ENST00000362566 104 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RNU6-454P-201ENST00000364292 107 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RNU6-275P-201ENST00000364910 107 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN1Q16799 RNU6-748P-201ENST00000384648 107 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RNU6-1168P-201ENST00000390831 104 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN1Q16799 AL441985.1-201ENST00000457727 251 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RNU1-61P-201ENST00000516107 151 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RNU1-95P-201ENST00000516357 160 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RNU1-128P-201ENST00000516704 160 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 MIR3684-201ENST00000579779 74 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 RPS15AP11-201ENST00000594193 385 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 AC091152.3-201ENST00000604227 325 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN1Q16799 HSPE1P7-201ENST00000604681 321 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 SNORD11B-201ENST00000607707 90 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 AC039056.2-201ENST00000622261 511 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 AC018692.3-201ENST00000623929 123 ntBASIC4.2□□□□□ -1.74
RTN1Q16799 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN1Q16799 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN1Q16799 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTN1Q16799 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN1Q16799 CEP170P1-201ENST00000502249 4587 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN1Q16799 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
RTN1Q16799 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN1Q16799 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN1Q16799 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RTN1Q16799 RNA5SP42-201ENST00000364278 115 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 SNORA5A-201ENST00000384111 134 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 Y_RNA.586-201ENST00000391146 98 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 AC027124.2-201ENST00000428249 105 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 CR769767.1-201ENST00000436337 346 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 AL133547.1-201ENST00000448546 220 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN1Q16799 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN1Q16799 SNORD19.2-201ENST00000516978 73 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 PCGEM1.1-201ENST00000613431 131 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 AL078604.3-201ENST00000615580 211 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 AC005562.2-201ENST00000618264 111 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 AC244205.2-202ENST00000635781 342 ntBASIC4.19□□□□□ -1.74
RTN1Q16799 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN1Q16799 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN1Q16799 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN1Q16799 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTN1Q16799 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN1Q16799 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RTN1Q16799 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN1Q16799 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RTN1Q16799 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN1Q16799 SNORD87-201ENST00000364849 89 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 MIR3074-201ENST00000384885 81 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 RNU6-239P-201ENST00000390990 99 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 RNU6-381P-201ENST00000391259 108 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 AL591034.1-201ENST00000407447 340 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN1Q16799 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN1Q16799 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN1Q16799 RN7SKP18-201ENST00000516005 275 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 SNORA70.18-201ENST00000516696 98 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 RNU6-579P-201ENST00000516879 102 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 RNU1-117P-201ENST00000517041 158 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN1Q16799 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN1Q16799 AC034105.4-201ENST00000568304 277 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN1Q16799 CR392039.5-201ENST00000623201 510 ntBASIC4.18□□□□□ -1.74
RTN1Q16799 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN1Q16799 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RTN1Q16799 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RTN1Q16799 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
RTN1Q16799 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN1Q16799 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN1Q16799 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN1Q16799 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RTN1Q16799 RNU6-529P-201ENST00000363383 104 ntBASIC4.17□□□□□ -1.74
RTN1Q16799 AL359837.1-201ENST00000381357 287 ntBASIC4.17□□□□□ -1.74
RTN1Q16799 AL031003.1-201ENST00000404229 172 ntBASIC4.17□□□□□ -1.74
RTN1Q16799 RNA5SP201-201ENST00000410316 124 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms