Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.37□□□□□ -1.71
NR1H3Q13133 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NR1H3Q13133 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
NR1H3Q13133 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H3Q13133 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H3Q13133 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H3Q13133 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
NR1H3Q13133 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.37□□□□□ -1.71
NR1H3Q13133 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
NR1H3Q13133 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H3Q13133 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H3Q13133 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
NR1H3Q13133 MIR372-201ENST00000362225 67 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 MIR367-201ENST00000362299 68 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 Y_RNA.127-201ENST00000363386 109 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 Y_RNA.361-201ENST00000365515 120 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 MIR539-201ENST00000365690 78 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 SNORA12-201ENST00000391162 147 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NR1H3Q13133 RNA5SP38-201ENST00000410750 119 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 AL691449.1-201ENST00000426570 421 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H3Q13133 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.36□□□□□ -1.71
NR1H3Q13133 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1H3Q13133 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.36□□□□□ -1.71
NR1H3Q13133 MIR4724-201ENST00000579485 89 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 AL670379.2-201ENST00000604983 252 ntBASIC4.36□□□□□ -1.71
NR1H3Q13133 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
NR1H3Q13133 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H3Q13133 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NR1H3Q13133 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H3Q13133 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.35□□□□□ -1.71
NR1H3Q13133 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H3Q13133 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H3Q13133 Y_RNA.273-201ENST00000364703 102 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 RNU6-144P-201ENST00000383951 107 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 SNORD20-201ENST00000384550 80 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 MIR23B-201ENST00000384832 97 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 SNORA48.5-201ENST00000391143 135 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 SNORA3C-201ENST00000408792 125 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H3Q13133 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H3Q13133 RNU6-1211P-201ENST00000459179 105 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 RPS29P19-201ENST00000479709 171 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 RNU6-1333P-201ENST00000516162 93 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 AC112693.2-201ENST00000556538 232 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 AC034105.4-201ENST00000568304 277 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 AC099778.2-201ENST00000610904 211 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 uc_338.14-201ENST00000613162 166 ntBASIC4.35□□□□□ -1.71
NR1H3Q13133 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H3Q13133 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H3Q13133 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NR1H3Q13133 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H3Q13133 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H3Q13133 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NR1H3Q13133 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H3Q13133 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H3Q13133 AC010680.1-201ENST00000590024 3590 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H3Q13133 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H3Q13133 Y_RNA.218-201ENST00000364218 104 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 RNA5SP130-201ENST00000364431 114 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 RPL21P65-201ENST00000406094 466 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 HSPE1P21-201ENST00000438283 308 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 RBMY2UP-201ENST00000453474 324 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H3Q13133 RN7SL604P-201ENST00000492589 296 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 AC006064.5-201ENST00000541782 248 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 AC079598.5-201ENST00000547460 117 ntBASIC4.34□□□□□ -1.71
NR1H3Q13133 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H3Q13133 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1H3Q13133 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.34□□□□□ -1.72
NR1H3Q13133 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NR1H3Q13133 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NR1H3Q13133 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H3Q13133 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H3Q13133 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H3Q13133 Y_RNA.71-201ENST00000362892 104 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 Y_RNA.172-201ENST00000363765 102 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 Y_RNA.353-201ENST00000365440 108 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 AP002088.1-201ENST00000382740 395 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 SNORD116-14-201ENST00000383894 92 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 SNORD116-17-201ENST00000383929 92 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 RNU6-643P-201ENST00000384018 107 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 Y_RNA.420-201ENST00000384043 110 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 SNORD116-15-201ENST00000384445 92 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 SNORD116-19-201ENST00000384729 92 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 MIR586-201ENST00000385035 97 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 MIR15B-201ENST00000385045 98 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H3Q13133 RNA5SP246-201ENST00000458909 119 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H3Q13133 AL360157.1-201ENST00000565962 87 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 AC022655.2-201ENST00000577280 318 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H3Q13133 MIR6875-201ENST00000617506 72 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NR1H3Q13133 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms