Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORD116-20-201ENST00000384529 92 ntBASIC2.61□□□□□ -1.99
LTBQ06643 MIR628-201ENST00000385229 95 ntBASIC2.61□□□□□ -1.99
LTBQ06643 MT-TR-201ENST00000387439 65 ntBASIC2.61□□□□□ -1.99
LTBQ06643 BTF3L4P2-201ENST00000392798 346 ntBASIC2.61□□□□□ -1.99
LTBQ06643 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LTBQ06643 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
LTBQ06643 AC108938.1-201ENST00000451204 136 ntBASIC2.61□□□□□ -1.99
LTBQ06643 AC104564.1-201ENST00000493028 407 ntBASIC2.61□□□□□ -1.99
LTBQ06643 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.61□□□□□ -1.99
LTBQ06643 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
LTBQ06643 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LTBQ06643 RPS29P30-201ENST00000600975 111 ntBASIC2.61□□□□□ -1.99
LTBQ06643 AL390123.1-201ENST00000603216 237 ntBASIC2.61□□□□□ -1.99
LTBQ06643 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.61□□□□□ -1.99
LTBQ06643 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.61□□□□□ -1.99
LTBQ06643 AC009541.1-201ENST00000438279 2662 ntBASIC2.61□□□□□ -1.99
LTBQ06643 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.61□□□□□ -1.99
LTBQ06643 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.61□□□□□ -1.99
LTBQ06643 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LTBQ06643 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
LTBQ06643 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LTBQ06643 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.6□□□□□ -1.99
LTBQ06643 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LTBQ06643 RNU6-799P-201ENST00000363567 107 ntBASIC2.6□□□□□ -1.99
LTBQ06643 Y_RNA.461-201ENST00000384263 103 ntBASIC2.6□□□□□ -1.99
LTBQ06643 Y_RNA.526-201ENST00000384572 110 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RNU6-713P-201ENST00000384761 107 ntBASIC2.6□□□□□ -1.99
LTBQ06643 MIR181A2-201ENST00000384863 110 ntBASIC2.6□□□□□ -1.99
LTBQ06643 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
LTBQ06643 MTCYBP2-201ENST00000407745 171 ntBASIC2.6□□□□□ -1.99
LTBQ06643 AL139132.1-201ENST00000431587 344 ntBASIC2.6□□□□□ -1.99
LTBQ06643 AL591043.1-201ENST00000432461 424 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RPEP5-201ENST00000441137 268 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RNU7-87P-201ENST00000459343 62 ntBASIC2.6□□□□□ -1.99
LTBQ06643 TOMM22P6-201ENST00000465035 409 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RPL30P1-201ENST00000488676 339 ntBASIC2.6□□□□□ -1.99
LTBQ06643 AC010469.2-201ENST00000496412 480 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RNU7-175P-201ENST00000515915 61 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RNU6-581P-201ENST00000516214 105 ntBASIC2.6□□□□□ -1.99
LTBQ06643 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
LTBQ06643 Y_RNA.680-201ENST00000516441 93 ntBASIC2.6□□□□□ -1.99
LTBQ06643 AC034114.1-201ENST00000520293 285 ntBASIC2.6□□□□□ -1.99
LTBQ06643 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LTBQ06643 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.6□□□□□ -1.99
LTBQ06643 AC090115.4-201ENST00000609970 188 ntBASIC2.6□□□□□ -1.99
LTBQ06643 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
LTBQ06643 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LTBQ06643 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LTBQ06643 Z75746.1-201ENST00000440243 2080 ntBASIC2.59□□□□□ -1.99
LTBQ06643 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LTBQ06643 SNORD56.1-201ENST00000362913 68 ntBASIC2.59□□□□□ -1.99
LTBQ06643 Y_RNA.447-201ENST00000384184 113 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RNA5SP252-201ENST00000391131 119 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RPL21P75-201ENST00000396599 483 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.59□□□□□ -1.99
LTBQ06643 RPL21P28-201ENST00000401418 483 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RNU6-121P-201ENST00000410525 99 ntBASIC2.59□□□□□ -1.99
LTBQ06643 NDUFS5P4-201ENST00000412983 318 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC074117.2-201ENST00000417130 397 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AL358453.1-201ENST00000422522 250 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AL590556.1-201ENST00000423231 483 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC063976.3-201ENST00000426849 329 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.59□□□□□ -1.99
LTBQ06643 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.59□□□□□ -1.99
LTBQ06643 LINC01399-202ENST00000458450 244 ntBASIC2.59□□□□□ -1.99
LTBQ06643 SNORD127-201ENST00000458892 86 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RPL21P39-201ENST00000463605 483 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC087190.1-201ENST00000484462 480 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC107032.1-201ENST00000485945 480 ntBASIC2.59□□□□□ -1.99
LTBQ06643 MRPL42P6-201ENST00000486397 371 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC132942.1-201ENST00000486753 483 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC093591.1-201ENST00000491435 481 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RPL23AP75-201ENST00000491601 451 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RPL21P16-201ENST00000495531 483 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC008413.1-201ENST00000511864 177 ntBASIC2.59□□□□□ -1.99
LTBQ06643 SNORA40.15-201ENST00000516884 107 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RNU6-388P-201ENST00000517012 105 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RNU6-389P-201ENST00000517048 105 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AP000867.2-201ENST00000532468 320 ntBASIC2.59□□□□□ -1.99
LTBQ06643 HSPE1P20-201ENST00000538133 289 ntBASIC2.59□□□□□ -1.99
LTBQ06643 AC023157.2-201ENST00000540596 141 ntBASIC2.59□□□□□ -1.99
LTBQ06643 RPL23AP78-201ENST00000599928 470 ntBASIC2.59□□□□□ -1.99
LTBQ06643 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LTBQ06643 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
LTBQ06643 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
LTBQ06643 AC233981.2-201ENST00000611524 1614 ntBASIC2.59□□□□□ -1.99
LTBQ06643 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -2
LTBQ06643 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
LTBQ06643 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
LTBQ06643 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.58□□□□□ -2
LTBQ06643 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.58□□□□□ -2
LTBQ06643 Y_RNA.27-201ENST00000362540 103 ntBASIC2.58□□□□□ -2
LTBQ06643 SNORD32A-201ENST00000364805 84 ntBASIC2.58□□□□□ -2
LTBQ06643 Y_RNA.288-201ENST00000364854 92 ntBASIC2.58□□□□□ -2
LTBQ06643 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
LTBQ06643 Y_RNA.458-201ENST00000384240 102 ntBASIC2.58□□□□□ -2
LTBQ06643 RNU6-611P-201ENST00000384276 104 ntBASIC2.58□□□□□ -2
LTBQ06643 MIR196B-201ENST00000384852 84 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms