Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 RNU6-720P-201ENST00000516363 108 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 AC069113.1-201ENST00000517763 267 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.74□□□□□ -2.13
CSTF1Q05048 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 AP001596.2-201ENST00000608410 312 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 AL359314.1-201ENST00000616913 261 ntBASIC1.74□□□□□ -2.13
CSTF1Q05048 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.74□□□□□ -2.13
CSTF1Q05048 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CSTF1Q05048 RNU6-623P-201ENST00000363143 105 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 RNU6-392P-201ENST00000364926 101 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 RNU6-1103P-201ENST00000384150 107 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AL606923.1-201ENST00000406616 190 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 MIR548F1-201ENST00000408667 84 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.73□□□□□ -2.13
CSTF1Q05048 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.73□□□□□ -2.13
CSTF1Q05048 MTND2P29-201ENST00000438595 412 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.73□□□□□ -2.13
CSTF1Q05048 TOMM22P6-201ENST00000465035 409 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.73□□□□□ -2.13
CSTF1Q05048 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSTF1Q05048 SNORA31.16-201ENST00000516773 139 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 SNORA25.17-201ENST00000517184 124 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
CSTF1Q05048 AL137161.1-201ENST00000532231 390 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.73□□□□□ -2.13
CSTF1Q05048 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.73□□□□□ -2.13
CSTF1Q05048 AC109446.1-201ENST00000566172 220 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.73□□□□□ -2.13
CSTF1Q05048 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AP000654.2-201ENST00000605633 586 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 AC015540.1-201ENST00000615828 501 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 MIR6863-201ENST00000636112 90 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSTF1Q05048 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
CSTF1Q05048 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
CSTF1Q05048 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CSTF1Q05048 Y_RNA.1-201ENST00000352915 104 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 RNU6-1090P-201ENST00000364065 94 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 RNU4-56P-201ENST00000364700 142 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSTF1Q05048 RNY1P14-201ENST00000384426 108 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 RNA5SP219-201ENST00000390940 113 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 RNU4-55P-201ENST00000410731 137 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 SRIP3-201ENST00000413200 219 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.72□□□□□ -2.13
CSTF1Q05048 CBX3P6-201ENST00000430257 527 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC019235.1-201ENST00000503847 207 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 Y_RNA.704-201ENST00000516851 102 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC245505.1-201ENST00000556398 224 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.72□□□□□ -2.13
CSTF1Q05048 TPRKBP2-201ENST00000565969 475 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 EIF1P4-201ENST00000572664 335 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 BNIP3P16-201ENST00000589779 534 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.72□□□□□ -2.13
CSTF1Q05048 CYP2C61P-201ENST00000604072 290 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CSTF1Q05048 uc_338.34-201ENST00000617467 174 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AL158209.2-201ENST00000619266 216 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 U1.36-201ENST00000620684 176 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC130454.1-201ENST00000622948 401 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 AC098679.4-201ENST00000624241 654 ntBASIC1.72□□□□□ -2.13
CSTF1Q05048 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.72□□□□□ -2.13
CSTF1Q05048 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU4-15P-201ENST00000362613 141 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU6-1285P-201ENST00000363480 105 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 Y_RNA.191-201ENST00000363972 113 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU5A-6P-201ENST00000384136 116 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU6-42P-201ENST00000384165 107 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 Y_RNA.504-201ENST00000384481 104 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.71□□□□□ -2.14
CSTF1Q05048 Y_RNA.599-201ENST00000410489 109 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 VN1R36P-201ENST00000414936 291 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.71□□□□□ -2.14
CSTF1Q05048 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.71□□□□□ -2.14
CSTF1Q05048 AL606489.2-201ENST00000433886 234 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 HSPE1P21-201ENST00000438283 308 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.71□□□□□ -2.14
CSTF1Q05048 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.71□□□□□ -2.14
CSTF1Q05048 AL356010.1-201ENST00000456364 102 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU7-167P-201ENST00000459160 62 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 GMFBP1-201ENST00000467831 427 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.71□□□□□ -2.14
CSTF1Q05048 AC082651.2-201ENST00000496833 166 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.71□□□□□ -2.14
CSTF1Q05048 MTND4P7-201ENST00000523876 130 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.71□□□□□ -2.14
CSTF1Q05048 AC012507.3-201ENST00000603556 477 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 HULC.1-201ENST00000612720 240 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 AC124864.2-201ENST00000624736 186 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CSTF1Q05048 AC099654.12-201ENST00000639868 649 ntBASIC1.71□□□□□ -2.14
CSTF1Q05048 RNU6-23P-201ENST00000363283 107 ntBASIC1.7□□□□□ -2.14
CSTF1Q05048 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
CSTF1Q05048 RNU6-1141P-201ENST00000364520 107 ntBASIC1.7□□□□□ -2.14
CSTF1Q05048 SNORD73A-201ENST00000386062 65 ntBASIC1.7□□□□□ -2.14
CSTF1Q05048 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.7□□□□□ -2.14
CSTF1Q05048 AL117339.3-201ENST00000418733 162 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms