Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PHC1P78364 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
PHC1P78364 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PHC1P78364 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
PHC1P78364 BX322639.1-202ENST00000423987 2213 ntBASIC3.18□□□□□ -1.9
PHC1P78364 Y_RNA.143-201ENST00000363520 106 ntBASIC3.18□□□□□ -1.9
PHC1P78364 Y_RNA.179-201ENST00000363844 90 ntBASIC3.18□□□□□ -1.9
PHC1P78364 Y_RNA.193-201ENST00000363979 102 ntBASIC3.18□□□□□ -1.9
PHC1P78364 Y_RNA.222-201ENST00000364264 102 ntBASIC3.18□□□□□ -1.9
PHC1P78364 RNU6-806P-201ENST00000365147 105 ntBASIC3.18□□□□□ -1.9
PHC1P78364 Y_RNA.333-201ENST00000365274 102 ntBASIC3.18□□□□□ -1.9
PHC1P78364 MIR218-1-201ENST00000384999 110 ntBASIC3.18□□□□□ -1.9
PHC1P78364 RNA5SP213-201ENST00000391031 106 ntBASIC3.18□□□□□ -1.9
PHC1P78364 SNORA46.1-201ENST00000391069 153 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AL512633.1-201ENST00000399931 655 ntBASIC3.18□□□□□ -1.9
PHC1P78364 RNA5SP201-201ENST00000410316 124 ntBASIC3.18□□□□□ -1.9
PHC1P78364 Y_RNA.595-201ENST00000410403 105 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.18□□□□□ -1.9
PHC1P78364 AC010095.1-201ENST00000443543 144 ntBASIC3.18□□□□□ -1.9
PHC1P78364 PCNPP5-201ENST00000452246 481 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AC007215.1-201ENST00000464893 276 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
PHC1P78364 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.18□□□□□ -1.9
PHC1P78364 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.18□□□□□ -1.9
PHC1P78364 EIF4A1P12-201ENST00000551910 141 ntBASIC3.18□□□□□ -1.9
PHC1P78364 MIR3199-1-201ENST00000582434 88 ntBASIC3.18□□□□□ -1.9
PHC1P78364 U3.45-201ENST00000607547 219 ntBASIC3.18□□□□□ -1.9
PHC1P78364 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
PHC1P78364 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
PHC1P78364 MIR376A1-201ENST00000616574 68 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AC010205.1-201ENST00000616668 449 ntBASIC3.18□□□□□ -1.9
PHC1P78364 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
PHC1P78364 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
PHC1P78364 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
PHC1P78364 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PHC1P78364 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
PHC1P78364 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHC1P78364 RNU4-35P-201ENST00000362588 141 ntBASIC3.17□□□□□ -1.9
PHC1P78364 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
PHC1P78364 RNA5SP119-201ENST00000362715 117 ntBASIC3.17□□□□□ -1.9
PHC1P78364 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.17□□□□□ -1.9
PHC1P78364 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
PHC1P78364 RNU6-245P-201ENST00000384020 107 ntBASIC3.17□□□□□ -1.9
PHC1P78364 AL079342.1-201ENST00000401460 267 ntBASIC3.17□□□□□ -1.9
PHC1P78364 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.17□□□□□ -1.9
PHC1P78364 AC027124.2-201ENST00000428249 105 ntBASIC3.17□□□□□ -1.9
PHC1P78364 AC106707.2-201ENST00000484182 374 ntBASIC3.17□□□□□ -1.9
PHC1P78364 AP003733.2-201ENST00000529409 171 ntBASIC3.17□□□□□ -1.9
PHC1P78364 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
PHC1P78364 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.17□□□□□ -1.9
PHC1P78364 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
PHC1P78364 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.17□□□□□ -1.9
PHC1P78364 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHC1P78364 Y_RNA.26-201ENST00000362539 101 ntBASIC3.16□□□□□ -1.9
PHC1P78364 MIR218-2-201ENST00000385006 110 ntBASIC3.16□□□□□ -1.9
PHC1P78364 MIR329-1-201ENST00000385028 80 ntBASIC3.16□□□□□ -1.9
PHC1P78364 MIR29B2-201ENST00000385055 81 ntBASIC3.16□□□□□ -1.9
PHC1P78364 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
PHC1P78364 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
PHC1P78364 Y_RNA.618-201ENST00000410949 107 ntBASIC3.16□□□□□ -1.9
PHC1P78364 LINC01399-202ENST00000458450 244 ntBASIC3.16□□□□□ -1.9
PHC1P78364 Y_RNA.683-201ENST00000516508 93 ntBASIC3.16□□□□□ -1.9
PHC1P78364 RNU6-570P-201ENST00000517051 105 ntBASIC3.16□□□□□ -1.9
PHC1P78364 AC026470.2-201ENST00000561492 181 ntBASIC3.16□□□□□ -1.9
PHC1P78364 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
PHC1P78364 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PHC1P78364 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.16□□□□□ -1.9
PHC1P78364 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
PHC1P78364 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PHC1P78364 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHC1P78364 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHC1P78364 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
PHC1P78364 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PHC1P78364 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PHC1P78364 RNU6-727P-201ENST00000363592 107 ntBASIC3.15□□□□□ -1.91
PHC1P78364 Y_RNA.288-201ENST00000364854 92 ntBASIC3.15□□□□□ -1.91
PHC1P78364 Y_RNA.396-201ENST00000383949 103 ntBASIC3.15□□□□□ -1.91
PHC1P78364 RNU6-793P-201ENST00000384233 104 ntBASIC3.15□□□□□ -1.91
PHC1P78364 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
PHC1P78364 MRPL35P1-201ENST00000404272 572 ntBASIC3.15□□□□□ -1.91
PHC1P78364 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
PHC1P78364 RNU2-20P-201ENST00000410425 191 ntBASIC3.15□□□□□ -1.91
PHC1P78364 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.15□□□□□ -1.91
PHC1P78364 RPS12P18-201ENST00000442381 270 ntBASIC3.15□□□□□ -1.91
PHC1P78364 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.15□□□□□ -1.91
PHC1P78364 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
PHC1P78364 MIR3671-201ENST00000580455 88 ntBASIC3.15□□□□□ -1.91
PHC1P78364 MIR3922-201ENST00000585192 84 ntBASIC3.15□□□□□ -1.91
PHC1P78364 AC005562.2-201ENST00000618264 111 ntBASIC3.15□□□□□ -1.91
PHC1P78364 MIR7157-201ENST00000635801 60 ntBASIC3.15□□□□□ -1.91
PHC1P78364 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHC1P78364 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
PHC1P78364 MTND5P35-201ENST00000557537 1720 ntBASIC3.14□□□□□ -1.91
PHC1P78364 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
PHC1P78364 SNORA18.3-201ENST00000384122 132 ntBASIC3.14□□□□□ -1.91
PHC1P78364 AC244505.4-201ENST00000434905 287 ntBASIC3.14□□□□□ -1.91
PHC1P78364 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
PHC1P78364 SSXP5-201ENST00000443473 287 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms