Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC091932.3-201ENST00000624223 323 ntBASIC3.5□□□□□ -1.85
YBX1P67809 AF127577.6-201ENST00000623352 2191 ntBASIC3.5□□□□□ -1.85
YBX1P67809 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
YBX1P67809 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
YBX1P67809 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
YBX1P67809 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.49□□□□□ -1.85
YBX1P67809 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
YBX1P67809 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
YBX1P67809 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
YBX1P67809 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
YBX1P67809 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
YBX1P67809 Y_RNA.182-201ENST00000363880 111 ntBASIC3.49□□□□□ -1.85
YBX1P67809 Y_RNA.215-201ENST00000364204 112 ntBASIC3.49□□□□□ -1.85
YBX1P67809 RNU6-312P-201ENST00000364629 107 ntBASIC3.49□□□□□ -1.85
YBX1P67809 MIR184-201ENST00000384962 84 ntBASIC3.49□□□□□ -1.85
YBX1P67809 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.49□□□□□ -1.85
YBX1P67809 MIR888-201ENST00000401186 77 ntBASIC3.49□□□□□ -1.85
YBX1P67809 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.49□□□□□ -1.85
YBX1P67809 SEPT7P4-201ENST00000437076 306 ntBASIC3.49□□□□□ -1.85
YBX1P67809 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.49□□□□□ -1.85
YBX1P67809 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.49□□□□□ -1.85
YBX1P67809 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.49□□□□□ -1.85
YBX1P67809 SNRPGP3-201ENST00000469405 227 ntBASIC3.49□□□□□ -1.85
YBX1P67809 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.49□□□□□ -1.85
YBX1P67809 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.49□□□□□ -1.85
YBX1P67809 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.49□□□□□ -1.85
YBX1P67809 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
YBX1P67809 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.49□□□□□ -1.85
YBX1P67809 AC009163.5-201ENST00000575421 637 ntBASIC3.49□□□□□ -1.85
YBX1P67809 RMST_8.1-201ENST00000610287 165 ntBASIC3.49□□□□□ -1.85
YBX1P67809 AL365222.1-201ENST00000614661 98 ntBASIC3.49□□□□□ -1.85
YBX1P67809 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
YBX1P67809 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.49□□□□□ -1.85
YBX1P67809 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.49□□□□□ -1.85
YBX1P67809 AL136164.4-201ENST00000625013 2135 ntBASIC3.49□□□□□ -1.85
YBX1P67809 AC099654.7-201ENST00000635788 2127 ntBASIC3.49□□□□□ -1.85
YBX1P67809 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
YBX1P67809 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.48□□□□□ -1.85
YBX1P67809 OTUD4P1-201ENST00000237841 3067 ntBASIC3.48□□□□□ -1.85
YBX1P67809 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
YBX1P67809 RNU6-727P-201ENST00000363592 107 ntBASIC3.48□□□□□ -1.85
YBX1P67809 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
YBX1P67809 Y_RNA.412-201ENST00000384001 104 ntBASIC3.48□□□□□ -1.85
YBX1P67809 RNU6-1310P-201ENST00000384153 107 ntBASIC3.48□□□□□ -1.85
YBX1P67809 RNU6-793P-201ENST00000384233 104 ntBASIC3.48□□□□□ -1.85
YBX1P67809 SNORA1.3-201ENST00000384676 136 ntBASIC3.48□□□□□ -1.85
YBX1P67809 RNU6-1248P-201ENST00000391096 64 ntBASIC3.48□□□□□ -1.85
YBX1P67809 ATP5A1P2-201ENST00000412323 255 ntBASIC3.48□□□□□ -1.85
YBX1P67809 NDUFS5P4-201ENST00000412983 318 ntBASIC3.48□□□□□ -1.85
YBX1P67809 AC019205.3-201ENST00000424573 156 ntBASIC3.48□□□□□ -1.85
YBX1P67809 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.48□□□□□ -1.85
YBX1P67809 RPS27AP9-201ENST00000477681 438 ntBASIC3.48□□□□□ -1.85
YBX1P67809 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.48□□□□□ -1.85
YBX1P67809 RPS27AP10-201ENST00000496103 208 ntBASIC3.48□□□□□ -1.85
YBX1P67809 SNORD116-25-201ENST00000516517 92 ntBASIC3.48□□□□□ -1.85
YBX1P67809 SUMO2P18-201ENST00000518873 252 ntBASIC3.48□□□□□ -1.85
YBX1P67809 CKS1BP7-201ENST00000522230 235 ntBASIC3.48□□□□□ -1.85
YBX1P67809 MIR3124-201ENST00000582636 67 ntBASIC3.48□□□□□ -1.85
YBX1P67809 SCARNA15.3-201ENST00000626315 122 ntBASIC3.48□□□□□ -1.85
YBX1P67809 SCARNA4.1-201ENST00000628597 123 ntBASIC3.48□□□□□ -1.85
YBX1P67809 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
YBX1P67809 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
YBX1P67809 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.48□□□□□ -1.85
YBX1P67809 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
YBX1P67809 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
YBX1P67809 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
YBX1P67809 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
YBX1P67809 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
YBX1P67809 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
YBX1P67809 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.47□□□□□ -1.85
YBX1P67809 Y_RNA.23-201ENST00000362496 106 ntBASIC3.47□□□□□ -1.85
YBX1P67809 AP000567.1-201ENST00000406413 156 ntBASIC3.47□□□□□ -1.85
YBX1P67809 AL591034.1-201ENST00000407447 340 ntBASIC3.47□□□□□ -1.85
YBX1P67809 RNA5SP475-201ENST00000410568 110 ntBASIC3.47□□□□□ -1.85
YBX1P67809 RNU6-1199P-201ENST00000411249 104 ntBASIC3.47□□□□□ -1.85
YBX1P67809 ELOCP21-201ENST00000412558 336 ntBASIC3.47□□□□□ -1.85
YBX1P67809 RPS26P42-201ENST00000413485 326 ntBASIC3.47□□□□□ -1.85
YBX1P67809 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.47□□□□□ -1.85
YBX1P67809 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.47□□□□□ -1.85
YBX1P67809 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.47□□□□□ -1.85
YBX1P67809 AC091179.3-201ENST00000474761 144 ntBASIC3.47□□□□□ -1.85
YBX1P67809 RPS29P20-201ENST00000489592 171 ntBASIC3.47□□□□□ -1.85
YBX1P67809 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.47□□□□□ -1.85
YBX1P67809 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.47□□□□□ -1.85
YBX1P67809 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.47□□□□□ -1.85
YBX1P67809 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.47□□□□□ -1.85
YBX1P67809 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.47□□□□□ -1.85
YBX1P67809 U4.6-201ENST00000621618 127 ntBASIC3.47□□□□□ -1.85
YBX1P67809 MIR3529-201ENST00000637713 78 ntBASIC3.47□□□□□ -1.85
YBX1P67809 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
YBX1P67809 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
YBX1P67809 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.46□□□□□ -1.86
YBX1P67809 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.46□□□□□ -1.86
YBX1P67809 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
YBX1P67809 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
YBX1P67809 RNU6-151P-201ENST00000364158 107 ntBASIC3.46□□□□□ -1.86
YBX1P67809 RNU4-84P-201ENST00000364200 139 ntBASIC3.46□□□□□ -1.86
YBX1P67809 RNU4-17P-201ENST00000365598 141 ntBASIC3.46□□□□□ -1.86
YBX1P67809 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.46□□□□□ -1.86
YBX1P67809 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms