Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RN7SKP101-201ENST00000411376 320 ntBASIC4.53□□□□□ -1.68
USP46P62068 AL135786.1-201ENST00000415892 214 ntBASIC4.53□□□□□ -1.68
USP46P62068 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.53□□□□□ -1.68
USP46P62068 RNU7-57P-201ENST00000459540 60 ntBASIC4.53□□□□□ -1.68
USP46P62068 RPS26P28-201ENST00000470806 348 ntBASIC4.53□□□□□ -1.68
USP46P62068 RPS26P55-201ENST00000471178 356 ntBASIC4.53□□□□□ -1.68
USP46P62068 RPL36AP48-201ENST00000485521 314 ntBASIC4.53□□□□□ -1.68
USP46P62068 RNU6-1299P-201ENST00000516316 100 ntBASIC4.53□□□□□ -1.68
USP46P62068 IGLV3-26-201ENST00000520756 302 ntBASIC4.53□□□□□ -1.68
USP46P62068 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.53□□□□□ -1.68
USP46P62068 TVP23BP1-201ENST00000557500 617 ntBASIC4.53□□□□□ -1.68
USP46P62068 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USP46P62068 AC002076.2-201ENST00000617362 122 ntBASIC4.53□□□□□ -1.68
USP46P62068 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.53□□□□□ -1.68
USP46P62068 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USP46P62068 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP46P62068 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
USP46P62068 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.53□□□□□ -1.69
USP46P62068 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.52□□□□□ -1.69
USP46P62068 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP46P62068 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP46P62068 RNU1-14P-201ENST00000362759 152 ntBASIC4.52□□□□□ -1.69
USP46P62068 SNORD74.4-201ENST00000364129 80 ntBASIC4.52□□□□□ -1.69
USP46P62068 RNA5SP175-201ENST00000364275 119 ntBASIC4.52□□□□□ -1.69
USP46P62068 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.52□□□□□ -1.69
USP46P62068 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.52□□□□□ -1.69
USP46P62068 AC010099.1-201ENST00000455434 375 ntBASIC4.52□□□□□ -1.69
USP46P62068 AP002884.2-201ENST00000471647 395 ntBASIC4.52□□□□□ -1.69
USP46P62068 S100A11P1-201ENST00000477525 312 ntBASIC4.52□□□□□ -1.69
USP46P62068 AC025445.1-201ENST00000502728 300 ntBASIC4.52□□□□□ -1.69
USP46P62068 RNU6-63P-201ENST00000516690 95 ntBASIC4.52□□□□□ -1.69
USP46P62068 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
USP46P62068 NDUFA5P6-201ENST00000542110 379 ntBASIC4.52□□□□□ -1.69
USP46P62068 AF117829.1-206ENST00000621883 3802 ntBASIC4.52□□□□□ -1.69
USP46P62068 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.52□□□□□ -1.69
USP46P62068 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
USP46P62068 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.52□□□□□ -1.69
USP46P62068 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP46P62068 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP46P62068 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
USP46P62068 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.51□□□□□ -1.69
USP46P62068 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
USP46P62068 Y_RNA.280-201ENST00000364765 112 ntBASIC4.51□□□□□ -1.69
USP46P62068 RNU6-750P-201ENST00000390946 107 ntBASIC4.51□□□□□ -1.69
USP46P62068 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.51□□□□□ -1.69
USP46P62068 AL353705.1-201ENST00000433468 480 ntBASIC4.51□□□□□ -1.69
USP46P62068 AL645939.1-201ENST00000453429 797 ntBASIC4.51□□□□□ -1.69
USP46P62068 RNU7-23P-201ENST00000459465 62 ntBASIC4.51□□□□□ -1.69
USP46P62068 Y_RNA.690-201ENST00000516603 95 ntBASIC4.51□□□□□ -1.69
USP46P62068 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.51□□□□□ -1.69
USP46P62068 GNRHR2P1-201ENST00000555315 631 ntBASIC4.51□□□□□ -1.69
USP46P62068 RN7SL600P-201ENST00000581811 299 ntBASIC4.51□□□□□ -1.69
USP46P62068 AC131055.1-201ENST00000584626 316 ntBASIC4.51□□□□□ -1.69
USP46P62068 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.51□□□□□ -1.69
USP46P62068 AL138880.2-201ENST00000616214 239 ntBASIC4.51□□□□□ -1.69
USP46P62068 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.51□□□□□ -1.69
USP46P62068 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP46P62068 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.51□□□□□ -1.69
USP46P62068 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.5□□□□□ -1.69
USP46P62068 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP46P62068 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.5□□□□□ -1.69
USP46P62068 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.5□□□□□ -1.69
USP46P62068 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USP46P62068 AL159152.1-201ENST00000635019 2587 ntBASIC4.5□□□□□ -1.69
USP46P62068 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USP46P62068 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP46P62068 RNU4-13P-201ENST00000364019 141 ntBASIC4.5□□□□□ -1.69
USP46P62068 SNORD58C-201ENST00000365223 64 ntBASIC4.5□□□□□ -1.69
USP46P62068 RNU6-484P-201ENST00000384016 107 ntBASIC4.5□□□□□ -1.69
USP46P62068 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
USP46P62068 MIR513A2-201ENST00000385249 127 ntBASIC4.5□□□□□ -1.69
USP46P62068 RNA5SP317-201ENST00000410176 116 ntBASIC4.5□□□□□ -1.69
USP46P62068 MIR1911-201ENST00000410783 80 ntBASIC4.5□□□□□ -1.69
USP46P62068 RNU2-55P-201ENST00000411146 174 ntBASIC4.5□□□□□ -1.69
USP46P62068 RNA5SP311-201ENST00000411290 116 ntBASIC4.5□□□□□ -1.69
USP46P62068 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.5□□□□□ -1.69
USP46P62068 HMGN2P16-201ENST00000456802 261 ntBASIC4.5□□□□□ -1.69
USP46P62068 Y_RNA.651-201ENST00000459380 103 ntBASIC4.5□□□□□ -1.69
USP46P62068 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.5□□□□□ -1.69
USP46P62068 RNA5SP315-201ENST00000516340 116 ntBASIC4.5□□□□□ -1.69
USP46P62068 RNA5SP312-201ENST00000517068 116 ntBASIC4.5□□□□□ -1.69
USP46P62068 AC007224.1-201ENST00000564410 144 ntBASIC4.5□□□□□ -1.69
USP46P62068 MIR3160-1-201ENST00000577972 85 ntBASIC4.5□□□□□ -1.69
USP46P62068 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.5□□□□□ -1.69
USP46P62068 MIR8059-201ENST00000620427 81 ntBASIC4.5□□□□□ -1.69
USP46P62068 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.5□□□□□ -1.69
USP46P62068 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP46P62068 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP46P62068 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
USP46P62068 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP46P62068 RNU6-674P-201ENST00000363831 107 ntBASIC4.49□□□□□ -1.69
USP46P62068 MIR181A2-201ENST00000384863 110 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms