Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.42□□□□□ -2.34
AP3S2P59780 AC068700.1-201ENST00000565862 3754 ntBASIC0.42□□□□□ -2.34
AP3S2P59780 RNU6-428P-201ENST00000362942 107 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.41□□□□□ -2.34
AP3S2P59780 AL133217.1-201ENST00000450980 425 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 AC007547.1-201ENST00000462177 490 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 AC098869.1-201ENST00000481627 292 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 RPS23P5-201ENST00000495419 428 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 RNU6-947P-201ENST00000516264 106 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
AP3S2P59780 AC004812.1-201ENST00000540773 146 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 EIF4A1P12-201ENST00000551910 141 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
AP3S2P59780 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.41□□□□□ -2.34
AP3S2P59780 GHRLOS.1-201ENST00000610995 70 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 MIR6715A-201ENST00000615929 79 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 AC009509.4-201ENST00000619202 509 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.41□□□□□ -2.34
AP3S2P59780 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.41□□□□□ -2.34
AP3S2P59780 BX322639.1-202ENST00000423987 2213 ntBASIC0.41□□□□□ -2.34
AP3S2P59780 RNU6-336P-201ENST00000364891 107 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.4□□□□□ -2.35
AP3S2P59780 AL606517.2-201ENST00000442855 241 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AL162395.1-201ENST00000457882 422 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AC005840.1-201ENST00000498412 377 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 TRMT112P2-201ENST00000512910 132 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 RNU2-34P-201ENST00000516534 121 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AC010376.1-201ENST00000522101 334 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AC133485.1-201ENST00000567176 124 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AC138907.6-201ENST00000568401 126 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 AL592221.1-201ENST00000605266 382 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 snoU13.31-201ENST00000607291 104 ntBASIC0.4□□□□□ -2.35
AP3S2P59780 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.4□□□□□ -2.35
AP3S2P59780 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
AP3S2P59780 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 RNU6-641P-201ENST00000384006 107 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 RNU6-17P-201ENST00000384245 107 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 RNU6-505P-201ENST00000384427 107 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 RNU6-18P-201ENST00000384527 107 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 Y_RNA.595-201ENST00000410403 105 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 RNU6-607P-201ENST00000411283 108 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 HMGN1P14-201ENST00000412459 517 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.39□□□□□ -2.35
AP3S2P59780 HSFY7P-201ENST00000432672 318 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 HSFY8P-201ENST00000437934 318 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
AP3S2P59780 GAPDHP17-201ENST00000449858 1001 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.39□□□□□ -2.35
AP3S2P59780 TMF1P1-201ENST00000576058 373 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 AC104984.5-201ENST00000586878 94 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 AC080078.2-201ENST00000603766 501 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 AL603839.4-201ENST00000624658 1005 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 AC019226.2-201ENST00000625973 424 ntBASIC0.39□□□□□ -2.35
AP3S2P59780 snoU2-30.2-201ENST00000362805 70 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 RNU6-552P-201ENST00000362869 119 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 SNORD32A-201ENST00000364805 84 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 SNORA36A-201ENST00000384221 132 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 RNU6-417P-201ENST00000384712 107 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 RNU6-1031P-201ENST00000384773 107 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.38□□□□□ -2.35
AP3S2P59780 AC078809.1-201ENST00000427601 140 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 TIMM9P3-201ENST00000428659 274 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.38□□□□□ -2.35
AP3S2P59780 AC016717.1-201ENST00000448918 286 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 SRRM1P2-201ENST00000464531 1192 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.38□□□□□ -2.35
AP3S2P59780 RPS26P48-201ENST00000491713 339 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.38□□□□□ -2.35
AP3S2P59780 AC108729.3-201ENST00000513484 108 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 AC112206.4-201ENST00000515142 405 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.38□□□□□ -2.35
AP3S2P59780 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 ZNF519P3-201ENST00000557158 1032 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.38□□□□□ -2.35
AP3S2P59780 Z98751.3-201ENST00000604447 521 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 AC064872.1-201ENST00000604823 1072 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 AL359821.1-201ENST00000605519 182 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
AP3S2P59780 AC009541.1-201ENST00000438279 2662 ntBASIC0.38□□□□□ -2.35
AP3S2P59780 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
AP3S2P59780 Y_RNA.97-201ENST00000363094 102 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 U3.4-201ENST00000363352 213 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 U3.8-201ENST00000363675 217 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 RNU6-1335P-201ENST00000365426 107 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 RNU6-61P-201ENST00000365528 109 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 RNA5SP467-201ENST00000391274 118 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 MIR208B-201ENST00000401172 77 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 RNU6-757P-201ENST00000410334 100 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 RNU2-39P-201ENST00000410604 198 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.37□□□□□ -2.35
AP3S2P59780 MTATP6P20-201ENST00000414147 562 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 AL035398.1-201ENST00000430869 322 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 AC002486.1-201ENST00000435098 391 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 FABP5P4-201ENST00000437203 171 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 HMGN2P34-201ENST00000437647 269 ntBASIC0.37□□□□□ -2.35
AP3S2P59780 AL358794.1-201ENST00000445689 381 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms