Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.71□□□□□ -1.82
RTP1P59025 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.71□□□□□ -1.82
RTP1P59025 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.71□□□□□ -1.82
RTP1P59025 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTP1P59025 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RTP1P59025 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTP1P59025 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
RTP1P59025 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RTP1P59025 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
RTP1P59025 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTP1P59025 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.7□□□□□ -1.82
RTP1P59025 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.7□□□□□ -1.82
RTP1P59025 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.7□□□□□ -1.82
RTP1P59025 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.82-201ENST00000363000 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.92-201ENST00000363043 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 RNU6-137P-201ENST00000363680 108 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.170-201ENST00000363746 110 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.235-201ENST00000364412 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.306-201ENST00000365015 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.312-201ENST00000365089 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.322-201ENST00000365151 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 SNORA36A-201ENST00000384221 132 ntBASIC3.7□□□□□ -1.82
RTP1P59025 MIR544A-201ENST00000384855 91 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AC126124.2-201ENST00000413542 321 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.7□□□□□ -1.82
RTP1P59025 RPL23AP82-202ENST00000427528 469 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.650-201ENST00000459002 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.638-201ENST00000459374 113 ntBASIC3.7□□□□□ -1.82
RTP1P59025 CENPBD1P1-201ENST00000464061 469 ntBASIC3.7□□□□□ -1.82
RTP1P59025 SNRPGP7-201ENST00000469016 106 ntBASIC3.7□□□□□ -1.82
RTP1P59025 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AP001025.1-201ENST00000486139 332 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AC091959.1-201ENST00000495857 238 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.777-201ENST00000516982 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.7□□□□□ -1.82
RTP1P59025 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.7□□□□□ -1.82
RTP1P59025 RPL21P9-201ENST00000556149 474 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.7□□□□□ -1.82
RTP1P59025 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.7□□□□□ -1.82
RTP1P59025 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.7□□□□□ -1.82
RTP1P59025 MIR5047-201ENST00000579212 100 ntBASIC3.7□□□□□ -1.82
RTP1P59025 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.771-201ENST00000598668 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 Y_RNA.789-201ENST00000622480 102 ntBASIC3.7□□□□□ -1.82
RTP1P59025 IGHVIII-44-202ENST00000636235 289 ntBASIC3.7□□□□□ -1.82
RTP1P59025 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTP1P59025 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RTP1P59025 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.7□□□□□ -1.82
RTP1P59025 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.69□□□□□ -1.82
RTP1P59025 AC022336.2-201ENST00000568966 2538 ntBASIC3.69□□□□□ -1.82
RTP1P59025 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 UBE2WP1-201ENST00000362030 340 ntBASIC3.69□□□□□ -1.82
RTP1P59025 MIR410-201ENST00000362222 80 ntBASIC3.69□□□□□ -1.82
RTP1P59025 RNU6-600P-201ENST00000362524 99 ntBASIC3.69□□□□□ -1.82
RTP1P59025 SNORD115-8-201ENST00000363856 82 ntBASIC3.69□□□□□ -1.82
RTP1P59025 SNORD115-38-201ENST00000365037 82 ntBASIC3.69□□□□□ -1.82
RTP1P59025 RNU6-1175P-201ENST00000365200 107 ntBASIC3.69□□□□□ -1.82
RTP1P59025 SNORD113-1-201ENST00000365321 69 ntBASIC3.69□□□□□ -1.82
RTP1P59025 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.69□□□□□ -1.82
RTP1P59025 MTCO1P5-201ENST00000433573 344 ntBASIC3.69□□□□□ -1.82
RTP1P59025 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
RTP1P59025 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.69□□□□□ -1.82
RTP1P59025 GPM6BP3-201ENST00000442797 145 ntBASIC3.69□□□□□ -1.82
RTP1P59025 TMSB4XP3-201ENST00000445144 114 ntBASIC3.69□□□□□ -1.82
RTP1P59025 RN7SL863P-201ENST00000462370 296 ntBASIC3.69□□□□□ -1.82
RTP1P59025 SNORA40.9-201ENST00000515895 93 ntBASIC3.69□□□□□ -1.82
RTP1P59025 SNORA31.23-201ENST00000517219 133 ntBASIC3.69□□□□□ -1.82
RTP1P59025 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.69□□□□□ -1.82
RTP1P59025 HSPE1P4-201ENST00000550617 308 ntBASIC3.69□□□□□ -1.82
RTP1P59025 HIGD1AP1-201ENST00000550979 275 ntBASIC3.69□□□□□ -1.82
RTP1P59025 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.69□□□□□ -1.82
RTP1P59025 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
RTP1P59025 AC104984.5-201ENST00000586878 94 ntBASIC3.69□□□□□ -1.82
RTP1P59025 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RTP1P59025 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.69□□□□□ -1.82
RTP1P59025 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTP1P59025 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTP1P59025 AL353746.1-201ENST00000566293 6881 ntBASIC3.68□□□□□ -1.82
RTP1P59025 RNA5SP240-201ENST00000365355 128 ntBASIC3.68□□□□□ -1.82
RTP1P59025 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
RTP1P59025 RNU6-514P-201ENST00000384208 107 ntBASIC3.68□□□□□ -1.82
RTP1P59025 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RTP1P59025 RNU6-918P-201ENST00000391219 106 ntBASIC3.68□□□□□ -1.82
RTP1P59025 AL390729.2-201ENST00000416137 156 ntBASIC3.68□□□□□ -1.82
RTP1P59025 AL358075.3-201ENST00000426289 226 ntBASIC3.68□□□□□ -1.82
RTP1P59025 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.68□□□□□ -1.82
RTP1P59025 MRPS10P1-201ENST00000448483 130 ntBASIC3.68□□□□□ -1.82
RTP1P59025 RPL23AP3-201ENST00000453844 468 ntBASIC3.68□□□□□ -1.82
RTP1P59025 RN7SL330P-201ENST00000469709 307 ntBASIC3.68□□□□□ -1.82
RTP1P59025 Y_RNA.662-201ENST00000516028 97 ntBASIC3.68□□□□□ -1.82
RTP1P59025 SNORA27.4-201ENST00000516650 95 ntBASIC3.68□□□□□ -1.82
RTP1P59025 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.68□□□□□ -1.82
RTP1P59025 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.68□□□□□ -1.82
RTP1P59025 MZT1P2-201ENST00000604387 248 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms