Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.78□□□□□ -1.96
RHBDL3P58872 MTND1P11-201ENST00000456661 876 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 RNU6-358P-201ENST00000516564 75 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 RNA5SP490-201ENST00000517141 136 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 RNU2-19P-201ENST00000517288 84 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.78□□□□□ -1.96
RHBDL3P58872 AC087241.2-201ENST00000535801 324 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.78□□□□□ -1.96
RHBDL3P58872 AC026470.2-201ENST00000561492 181 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RHBDL3P58872 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
RHBDL3P58872 MIR1248-201ENST00000629190 106 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RHBDL3P58872 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
RHBDL3P58872 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RHBDL3P58872 Y_RNA.151-201ENST00000363566 112 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 RNU6-378P-201ENST00000384324 107 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 MIR517A-201ENST00000385001 87 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 AL079342.1-201ENST00000401460 267 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 EIF4EP2-201ENST00000422816 654 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 RPS12P2-201ENST00000439728 269 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.77□□□□□ -1.97
RHBDL3P58872 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 MIR3942-201ENST00000585264 109 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 MIR3976-201ENST00000606807 139 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.77□□□□□ -1.97
RHBDL3P58872 AC022202.1-201ENST00000613515 211 ntBASIC2.77□□□□□ -1.97
RHBDL3P58872 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
RHBDL3P58872 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.77□□□□□ -1.97
RHBDL3P58872 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
RHBDL3P58872 Y_RNA.86-201ENST00000363020 111 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 RNU5B-2P-201ENST00000363036 113 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 MIR518A2-201ENST00000384966 87 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 RNA5SP465-201ENST00000391195 109 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.76□□□□□ -1.97
RHBDL3P58872 UBL5P3-201ENST00000475112 231 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 MTCO2P30-201ENST00000503662 364 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 AC093259.1-201ENST00000509755 300 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 RNU6-566P-201ENST00000516790 107 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.76□□□□□ -1.97
RHBDL3P58872 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.76□□□□□ -1.97
RHBDL3P58872 AC090517.1-201ENST00000569307 266 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.76□□□□□ -1.97
RHBDL3P58872 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
RHBDL3P58872 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
RHBDL3P58872 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RHBDL3P58872 MIR320B2-201ENST00000408479 138 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.75□□□□□ -1.97
RHBDL3P58872 DPH3P2-201ENST00000422618 250 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 AL590632.1-201ENST00000424289 371 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 RPS15AP28-201ENST00000435088 386 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 AC055731.1-201ENST00000474387 401 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 RNU6-991P-201ENST00000516168 107 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 RNU1-54P-201ENST00000517181 120 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.75□□□□□ -1.97
RHBDL3P58872 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.75□□□□□ -1.97
RHBDL3P58872 AC026464.5-201ENST00000562497 722 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 MIR5694-201ENST00000581190 76 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 AL359314.1-201ENST00000616913 261 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.75□□□□□ -1.97
RHBDL3P58872 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.75□□□□□ -1.97
RHBDL3P58872 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RHBDL3P58872 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.75□□□□□ -1.97
RHBDL3P58872 AC008555.8-201ENST00000623602 2168 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RHBDL3P58872 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RHBDL3P58872 RNU6-438P-201ENST00000365561 103 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 AC096638.1-201ENST00000444678 216 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.74□□□□□ -1.97
RHBDL3P58872 RNU4-49P-201ENST00000516080 140 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 RNU5F-4P-201ENST00000516581 114 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 RNU6-273P-201ENST00000516937 96 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 RNA5SP454-201ENST00000517231 127 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.74□□□□□ -1.97
RHBDL3P58872 IGKV3-31-201ENST00000523109 329 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 SNRPGP18-201ENST00000553000 214 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.74□□□□□ -1.97
RHBDL3P58872 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 AC011712.1-201ENST00000588959 234 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 7SK.7-201ENST00000603504 247 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 AC009248.2-201ENST00000619826 254 ntBASIC2.74□□□□□ -1.97
RHBDL3P58872 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RHBDL3P58872 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RHBDL3P58872 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RHBDL3P58872 RNU6-160P-201ENST00000384591 107 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 MIR504-201ENST00000385065 83 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 MIR1262-201ENST00000408276 93 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 HMGN2P18-201ENST00000450680 270 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 OR2AQ1P-201ENST00000451972 200 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 RPS23P5-201ENST00000495419 428 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
RHBDL3P58872 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.73□□□□□ -1.97
RHBDL3P58872 AL160394.1-201ENST00000624765 724 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms