Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SNORA43.4-201ENST00000629559 138 ntBASIC1.34□□□□□ -2.19
VSX2P58304 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VSX2P58304 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
VSX2P58304 Y_RNA.504-201ENST00000384481 104 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AL357139.1-201ENST00000407792 426 ntBASIC1.33□□□□□ -2.2
VSX2P58304 RN7SKP61-201ENST00000410642 295 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AC123900.1-201ENST00000420390 96 ntBASIC1.33□□□□□ -2.2
VSX2P58304 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.33□□□□□ -2.2
VSX2P58304 AL356010.1-201ENST00000456364 102 ntBASIC1.33□□□□□ -2.2
VSX2P58304 RNU7-167P-201ENST00000459160 62 ntBASIC1.33□□□□□ -2.2
VSX2P58304 TOMM22P6-201ENST00000465035 409 ntBASIC1.33□□□□□ -2.2
VSX2P58304 GMFBP1-201ENST00000467831 427 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AC005908.1-201ENST00000468701 347 ntBASIC1.33□□□□□ -2.2
VSX2P58304 ARL2BPP4-201ENST00000506854 471 ntBASIC1.33□□□□□ -2.2
VSX2P58304 RNU6-1098P-201ENST00000516772 96 ntBASIC1.33□□□□□ -2.2
VSX2P58304 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
VSX2P58304 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.33□□□□□ -2.2
VSX2P58304 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.33□□□□□ -2.2
VSX2P58304 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
VSX2P58304 SNORA59B-202ENST00000578183 701 ntBASIC1.33□□□□□ -2.2
VSX2P58304 MIR3923-201ENST00000579521 83 ntBASIC1.33□□□□□ -2.2
VSX2P58304 VN1R107P-201ENST00000601784 209 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AP001836.1-201ENST00000604675 523 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AC087752.4-201ENST00000605911 462 ntBASIC1.33□□□□□ -2.2
VSX2P58304 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AC068205.3-201ENST00000636385 468 ntBASIC1.33□□□□□ -2.2
VSX2P58304 AP000560.1-201ENST00000624150 1937 ntBASIC1.32□□□□□ -2.2
VSX2P58304 MIR424-201ENST00000362227 98 ntBASIC1.32□□□□□ -2.2
VSX2P58304 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
VSX2P58304 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
VSX2P58304 RNU6-1158P-201ENST00000391167 107 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AL049545.1-201ENST00000401856 572 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.32□□□□□ -2.2
VSX2P58304 AC007098.1-201ENST00000420122 367 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AC139712.2-201ENST00000424302 339 ntBASIC1.32□□□□□ -2.2
VSX2P58304 MTCO3P46-201ENST00000425787 232 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AC092447.3-201ENST00000426027 686 ntBASIC1.32□□□□□ -2.2
VSX2P58304 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.32□□□□□ -2.2
VSX2P58304 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.32□□□□□ -2.2
VSX2P58304 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.32□□□□□ -2.2
VSX2P58304 AC007547.1-201ENST00000462177 490 ntBASIC1.32□□□□□ -2.2
VSX2P58304 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.32□□□□□ -2.2
VSX2P58304 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.32□□□□□ -2.2
VSX2P58304 AC021231.3-201ENST00000558497 370 ntBASIC1.32□□□□□ -2.2
VSX2P58304 NIFKP6-201ENST00000598115 845 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AC121247.2-201ENST00000604776 136 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AP001596.2-201ENST00000608410 312 ntBASIC1.32□□□□□ -2.2
VSX2P58304 AL354950.2-201ENST00000617939 290 ntBASIC1.32□□□□□ -2.2
VSX2P58304 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
VSX2P58304 CBX3P1-201ENST00000325243 554 ntBASIC1.31□□□□□ -2.2
VSX2P58304 SNORA26.3-201ENST00000391119 136 ntBASIC1.31□□□□□ -2.2
VSX2P58304 MTCO3P41-201ENST00000414801 328 ntBASIC1.31□□□□□ -2.2
VSX2P58304 MTCO2P19-201ENST00000427513 598 ntBASIC1.31□□□□□ -2.2
VSX2P58304 AC073415.1-201ENST00000449240 153 ntBASIC1.31□□□□□ -2.2
VSX2P58304 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.31□□□□□ -2.2
VSX2P58304 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
VSX2P58304 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.31□□□□□ -2.2
VSX2P58304 AC008628.2-201ENST00000502605 298 ntBASIC1.31□□□□□ -2.2
VSX2P58304 AC097473.1-201ENST00000508142 408 ntBASIC1.31□□□□□ -2.2
VSX2P58304 RNU6-1038P-201ENST00000516516 104 ntBASIC1.31□□□□□ -2.2
VSX2P58304 Y_RNA.695-201ENST00000516715 107 ntBASIC1.31□□□□□ -2.2
VSX2P58304 RNU6-323P-201ENST00000521915 107 ntBASIC1.31□□□□□ -2.2
VSX2P58304 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.31□□□□□ -2.2
VSX2P58304 MIR5094-201ENST00000578766 85 ntBASIC1.31□□□□□ -2.2
VSX2P58304 Z98751.3-201ENST00000604447 521 ntBASIC1.31□□□□□ -2.2
VSX2P58304 HULC.1-201ENST00000612720 240 ntBASIC1.31□□□□□ -2.2
VSX2P58304 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
VSX2P58304 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.31□□□□□ -2.2
VSX2P58304 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.31□□□□□ -2.2
VSX2P58304 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VSX2P58304 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
VSX2P58304 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VSX2P58304 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VSX2P58304 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
VSX2P58304 U3.9-201ENST00000363823 204 ntBASIC1.3□□□□□ -2.2
VSX2P58304 Y_RNA.226-201ENST00000364337 114 ntBASIC1.3□□□□□ -2.2
VSX2P58304 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
VSX2P58304 RNU6-996P-201ENST00000365438 107 ntBASIC1.3□□□□□ -2.2
VSX2P58304 RNU6-296P-201ENST00000384608 107 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.3□□□□□ -2.2
VSX2P58304 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
VSX2P58304 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.3□□□□□ -2.2
VSX2P58304 VN1R108P-201ENST00000431580 830 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
VSX2P58304 MTCO1P19-201ENST00000443487 500 ntBASIC1.3□□□□□ -2.2
VSX2P58304 RNU7-14P-201ENST00000459331 62 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.3□□□□□ -2.2
VSX2P58304 AC114801.2-201ENST00000503825 781 ntBASIC1.3□□□□□ -2.2
VSX2P58304 FAM206BP-201ENST00000510179 541 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AC005741.1-201ENST00000511094 432 ntBASIC1.3□□□□□ -2.2
VSX2P58304 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.3□□□□□ -2.2
VSX2P58304 AC007834.2-201ENST00000536310 343 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AC090115.3-201ENST00000553218 849 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.3□□□□□ -2.2
VSX2P58304 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.3□□□□□ -2.2
VSX2P58304 AL158063.1-201ENST00000615349 536 ntBASIC1.3□□□□□ -2.2
VSX2P58304 AP000770.2-201ENST00000623694 100 ntBASIC1.3□□□□□ -2.2
VSX2P58304 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.3□□□□□ -2.2
VSX2P58304 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms