Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.68□□□□□ -2.14
LIM2P55344 MTCO1P29-201ENST00000496868 288 ntBASIC1.68□□□□□ -2.14
LIM2P55344 RPL23AP63-201ENST00000498752 471 ntBASIC1.68□□□□□ -2.14
LIM2P55344 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
LIM2P55344 Y_RNA.704-201ENST00000516851 102 ntBASIC1.68□□□□□ -2.14
LIM2P55344 AC025423.5-201ENST00000550230 219 ntBASIC1.68□□□□□ -2.14
LIM2P55344 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.68□□□□□ -2.14
LIM2P55344 AC010525.2-201ENST00000590920 195 ntBASIC1.68□□□□□ -2.14
LIM2P55344 AC078795.3-201ENST00000602913 472 ntBASIC1.68□□□□□ -2.14
LIM2P55344 AC064836.2-201ENST00000609491 462 ntBASIC1.68□□□□□ -2.14
LIM2P55344 AL121757.2-201ENST00000611223 313 ntBASIC1.68□□□□□ -2.14
LIM2P55344 RMST_6.1-201ENST00000611980 203 ntBASIC1.68□□□□□ -2.14
LIM2P55344 PCGEM1.1-201ENST00000613431 131 ntBASIC1.68□□□□□ -2.14
LIM2P55344 AC063943.3-201ENST00000615562 356 ntBASIC1.68□□□□□ -2.14
LIM2P55344 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
LIM2P55344 AC233981.2-201ENST00000611524 1614 ntBASIC1.67□□□□□ -2.14
LIM2P55344 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LIM2P55344 Y_RNA.573-201ENST00000384763 105 ntBASIC1.67□□□□□ -2.14
LIM2P55344 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
LIM2P55344 MIR1262-201ENST00000408276 93 ntBASIC1.67□□□□□ -2.14
LIM2P55344 RNA5SP450-201ENST00000411206 102 ntBASIC1.67□□□□□ -2.14
LIM2P55344 RPS26P42-201ENST00000413485 326 ntBASIC1.67□□□□□ -2.14
LIM2P55344 ZNF885P-201ENST00000420174 1098 ntBASIC1.67□□□□□ -2.14
LIM2P55344 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.67□□□□□ -2.14
LIM2P55344 RPL9P9-202ENST00000466501 579 ntBASIC1.67□□□□□ -2.14
LIM2P55344 SNRPGP7-201ENST00000469016 106 ntBASIC1.67□□□□□ -2.14
LIM2P55344 AC116337.1-201ENST00000509680 687 ntBASIC1.67□□□□□ -2.14
LIM2P55344 Y_RNA.665-201ENST00000516177 98 ntBASIC1.67□□□□□ -2.14
LIM2P55344 EIF4A1P12-201ENST00000551910 141 ntBASIC1.67□□□□□ -2.14
LIM2P55344 TPRKBP2-201ENST00000565969 475 ntBASIC1.67□□□□□ -2.14
LIM2P55344 CPDP1-201ENST00000579660 283 ntBASIC1.67□□□□□ -2.14
LIM2P55344 AL078605.1-201ENST00000603529 500 ntBASIC1.67□□□□□ -2.14
LIM2P55344 AL162373.1-201ENST00000620433 407 ntBASIC1.67□□□□□ -2.14
LIM2P55344 AC098657.3-201ENST00000620434 263 ntBASIC1.67□□□□□ -2.14
LIM2P55344 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
LIM2P55344 MIR1248-201ENST00000629190 106 ntBASIC1.67□□□□□ -2.14
LIM2P55344 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
LIM2P55344 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LIM2P55344 AC009541.1-201ENST00000438279 2662 ntBASIC1.66□□□□□ -2.14
LIM2P55344 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LIM2P55344 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.66□□□□□ -2.14
LIM2P55344 RNU6-234P-201ENST00000365229 104 ntBASIC1.66□□□□□ -2.14
LIM2P55344 Y_RNA.504-201ENST00000384481 104 ntBASIC1.66□□□□□ -2.14
LIM2P55344 MIR450B-201ENST00000401182 78 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
LIM2P55344 U3.40-201ENST00000408706 208 ntBASIC1.66□□□□□ -2.14
LIM2P55344 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.66□□□□□ -2.14
LIM2P55344 AC012306.1-201ENST00000423267 114 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.66□□□□□ -2.14
LIM2P55344 MRPS10P2-201ENST00000431226 381 ntBASIC1.66□□□□□ -2.14
LIM2P55344 PPP1R2P5-201ENST00000457256 603 ntBASIC1.66□□□□□ -2.14
LIM2P55344 RPL23AP42-201ENST00000471152 471 ntBASIC1.66□□□□□ -2.14
LIM2P55344 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.66□□□□□ -2.14
LIM2P55344 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.66□□□□□ -2.14
LIM2P55344 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.66□□□□□ -2.14
LIM2P55344 AC093259.1-201ENST00000509755 300 ntBASIC1.66□□□□□ -2.14
LIM2P55344 RNU6-965P-201ENST00000516721 96 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AC087441.2-201ENST00000529141 262 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AC011494.1-201ENST00000596454 237 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AC005034.5-201ENST00000604219 466 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AC009994.1-201ENST00000606889 253 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AF250324.2-201ENST00000608299 610 ntBASIC1.66□□□□□ -2.14
LIM2P55344 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
LIM2P55344 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
LIM2P55344 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIM2P55344 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
LIM2P55344 RNU1-58P-201ENST00000362413 163 ntBASIC1.65□□□□□ -2.15
LIM2P55344 RNU6-254P-201ENST00000363377 107 ntBASIC1.65□□□□□ -2.15
LIM2P55344 Y_RNA.332-201ENST00000365271 113 ntBASIC1.65□□□□□ -2.15
LIM2P55344 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LIM2P55344 MIR1283-2-201ENST00000408621 87 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AL158823.1-201ENST00000418441 478 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.65□□□□□ -2.15
LIM2P55344 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.65□□□□□ -2.15
LIM2P55344 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.65□□□□□ -2.15
LIM2P55344 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
LIM2P55344 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.65□□□□□ -2.15
LIM2P55344 AC091874.1-201ENST00000511402 339 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AC092436.3-201ENST00000511788 257 ntBASIC1.65□□□□□ -2.15
LIM2P55344 Y_RNA.655-201ENST00000515919 96 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.65□□□□□ -2.15
LIM2P55344 AC016957.1-201ENST00000534895 309 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AC026371.1-201ENST00000551867 419 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
LIM2P55344 MIR4287-201ENST00000579398 78 ntBASIC1.65□□□□□ -2.15
LIM2P55344 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
LIM2P55344 FGF7P1-201ENST00000582820 288 ntBASIC1.65□□□□□ -2.15
LIM2P55344 MIR8076-201ENST00000611401 83 ntBASIC1.65□□□□□ -2.15
LIM2P55344 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.65□□□□□ -2.15
LIM2P55344 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
LIM2P55344 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LIM2P55344 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LIM2P55344 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.64□□□□□ -2.15
LIM2P55344 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LIM2P55344 Y_RNA.3-201ENST00000362331 103 ntBASIC1.64□□□□□ -2.15
LIM2P55344 RNU1-76P-201ENST00000362903 159 ntBASIC1.64□□□□□ -2.15
LIM2P55344 RNU6-1164P-201ENST00000364428 107 ntBASIC1.64□□□□□ -2.15
LIM2P55344 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LIM2P55344 RNU6-1286P-201ENST00000383871 107 ntBASIC1.64□□□□□ -2.15
LIM2P55344 Y_RNA.450-201ENST00000384198 113 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms