Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC243829.7-201ENST00000633081 225 ntBASIC2.17□□□□□ -2.06
CDH13P55290 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH13P55290 AC233981.2-201ENST00000611524 1614 ntBASIC2.17□□□□□ -2.06
CDH13P55290 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH13P55290 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH13P55290 CBX3P1-201ENST00000325243 554 ntBASIC2.16□□□□□ -2.06
CDH13P55290 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
CDH13P55290 SNORD50.1-201ENST00000362987 71 ntBASIC2.16□□□□□ -2.06
CDH13P55290 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
CDH13P55290 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
CDH13P55290 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
CDH13P55290 MT-TL1-201ENST00000386347 75 ntBASIC2.16□□□□□ -2.06
CDH13P55290 SNORA12-201ENST00000391162 147 ntBASIC2.16□□□□□ -2.06
CDH13P55290 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH13P55290 MIR208B-201ENST00000401172 77 ntBASIC2.16□□□□□ -2.06
CDH13P55290 RNA5SP494-201ENST00000410653 129 ntBASIC2.16□□□□□ -2.06
CDH13P55290 IPO7P1-201ENST00000442031 636 ntBASIC2.16□□□□□ -2.06
CDH13P55290 AC245102.2-201ENST00000448956 180 ntBASIC2.16□□□□□ -2.06
CDH13P55290 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH13P55290 AC079354.2-201ENST00000453523 154 ntBASIC2.16□□□□□ -2.06
CDH13P55290 PRELID3BP1-201ENST00000457142 540 ntBASIC2.16□□□□□ -2.06
CDH13P55290 PPP1R2P5-201ENST00000457256 603 ntBASIC2.16□□□□□ -2.06
CDH13P55290 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH13P55290 RNA5SP281-201ENST00000516504 135 ntBASIC2.16□□□□□ -2.06
CDH13P55290 RNU1-54P-201ENST00000517181 120 ntBASIC2.16□□□□□ -2.06
CDH13P55290 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH13P55290 MRPS36P4-201ENST00000534436 298 ntBASIC2.16□□□□□ -2.06
CDH13P55290 AC109446.1-201ENST00000566172 220 ntBASIC2.16□□□□□ -2.06
CDH13P55290 AL031274.2-201ENST00000599419 203 ntBASIC2.16□□□□□ -2.06
CDH13P55290 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.16□□□□□ -2.06
CDH13P55290 MIR1248-201ENST00000629190 106 ntBASIC2.16□□□□□ -2.06
CDH13P55290 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDH13P55290 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDH13P55290 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CDH13P55290 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CDH13P55290 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDH13P55290 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH13P55290 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
CDH13P55290 Y_RNA.160-201ENST00000363677 92 ntBASIC2.15□□□□□ -2.07
CDH13P55290 Y_RNA.166-201ENST00000363730 102 ntBASIC2.15□□□□□ -2.07
CDH13P55290 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
CDH13P55290 AL357139.1-201ENST00000407792 426 ntBASIC2.15□□□□□ -2.07
CDH13P55290 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH13P55290 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH13P55290 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
CDH13P55290 MTND5P5-201ENST00000503764 376 ntBASIC2.15□□□□□ -2.07
CDH13P55290 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH13P55290 Y_RNA.682-201ENST00000516457 100 ntBASIC2.15□□□□□ -2.07
CDH13P55290 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
CDH13P55290 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
CDH13P55290 HSPE1P18-201ENST00000517602 280 ntBASIC2.15□□□□□ -2.07
CDH13P55290 MIR4790-201ENST00000577799 79 ntBASIC2.15□□□□□ -2.07
CDH13P55290 AC009318.2-201ENST00000610917 651 ntBASIC2.15□□□□□ -2.07
CDH13P55290 MIR6852-201ENST00000621699 66 ntBASIC2.15□□□□□ -2.07
CDH13P55290 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
CDH13P55290 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDH13P55290 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CDH13P55290 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH13P55290 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH13P55290 RNU6-845P-201ENST00000362578 103 ntBASIC2.14□□□□□ -2.07
CDH13P55290 RNU6-593P-201ENST00000364716 112 ntBASIC2.14□□□□□ -2.07
CDH13P55290 RNU6-234P-201ENST00000365229 104 ntBASIC2.14□□□□□ -2.07
CDH13P55290 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH13P55290 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
CDH13P55290 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
CDH13P55290 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
CDH13P55290 MIR548K-201ENST00000408406 116 ntBASIC2.14□□□□□ -2.07
CDH13P55290 RPL21P111-201ENST00000418453 477 ntBASIC2.14□□□□□ -2.07
CDH13P55290 AL353705.4-201ENST00000449661 238 ntBASIC2.14□□□□□ -2.07
CDH13P55290 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH13P55290 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH13P55290 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH13P55290 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH13P55290 AF186996.7-201ENST00000492781 209 ntBASIC2.14□□□□□ -2.07
CDH13P55290 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.14□□□□□ -2.07
CDH13P55290 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH13P55290 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.14□□□□□ -2.07
CDH13P55290 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.14□□□□□ -2.07
CDH13P55290 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH13P55290 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
CDH13P55290 AC009831.4-201ENST00000620744 325 ntBASIC2.14□□□□□ -2.07
CDH13P55290 SCARNA4-201ENST00000629045 128 ntBASIC2.14□□□□□ -2.07
CDH13P55290 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH13P55290 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CDH13P55290 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDH13P55290 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CDH13P55290 RNU6-1093P-201ENST00000391194 107 ntBASIC2.13□□□□□ -2.07
CDH13P55290 RNU6-876P-201ENST00000391295 104 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC074085.1-201ENST00000413598 418 ntBASIC2.13□□□□□ -2.07
CDH13P55290 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDH13P55290 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.13□□□□□ -2.07
CDH13P55290 OR2AQ1P-201ENST00000451972 200 ntBASIC2.13□□□□□ -2.07
CDH13P55290 SNORD5.1-201ENST00000458800 75 ntBASIC2.13□□□□□ -2.07
CDH13P55290 RPL23AP75-201ENST00000491601 451 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC116337.1-201ENST00000509680 687 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH13P55290 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH13P55290 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
CDH13P55290 AC078899.2-201ENST00000595282 212 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms