Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH11P55287 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH11P55287 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDH11P55287 MTND5P9-201ENST00000503854 1755 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH11P55287 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDH11P55287 RNU4-15P-201ENST00000362613 141 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
CDH11P55287 Y_RNA.384-201ENST00000383909 102 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RNU6-142P-201ENST00000384019 107 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RNU6-331P-201ENST00000384724 107 ntBASIC2.23□□□□□ -2.05
CDH11P55287 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDH11P55287 RNA5SP201-201ENST00000410316 124 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC003685.2-201ENST00000422795 395 ntBASIC2.23□□□□□ -2.05
CDH11P55287 USMG5P1-201ENST00000425964 177 ntBASIC2.23□□□□□ -2.05
CDH11P55287 MTND3P23-201ENST00000431980 347 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH11P55287 AL445687.1-201ENST00000439946 251 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC090515.1-201ENST00000465295 476 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RN7SL429P-201ENST00000479090 223 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RN7SL489P-201ENST00000486185 223 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RN7SL327P-201ENST00000488659 223 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AF186996.7-201ENST00000492781 209 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC097473.1-201ENST00000508142 408 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH11P55287 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH11P55287 CBX3P8-201ENST00000532412 525 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH11P55287 MIR5701-3-201ENST00000578890 82 ntBASIC2.23□□□□□ -2.05
CDH11P55287 MIR5690-201ENST00000583739 73 ntBASIC2.23□□□□□ -2.05
CDH11P55287 MIR5701-1-201ENST00000585138 82 ntBASIC2.23□□□□□ -2.05
CDH11P55287 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.23□□□□□ -2.05
CDH11P55287 AC005014.2-201ENST00000607795 599 ntBASIC2.23□□□□□ -2.05
CDH11P55287 MIR5701-2-201ENST00000615634 82 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RN7SL853P-201ENST00000617250 223 ntBASIC2.23□□□□□ -2.05
CDH11P55287 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH11P55287 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH11P55287 RNU6-595P-201ENST00000363944 107 ntBASIC2.22□□□□□ -2.05
CDH11P55287 Y_RNA.535-201ENST00000384612 99 ntBASIC2.22□□□□□ -2.05
CDH11P55287 SNORA41-201ENST00000384675 132 ntBASIC2.22□□□□□ -2.05
CDH11P55287 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDH11P55287 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDH11P55287 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH11P55287 AL590135.1-201ENST00000422215 156 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH11P55287 AL358453.1-201ENST00000422522 250 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AC019205.3-201ENST00000424573 156 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH11P55287 GPM6BP3-201ENST00000442797 145 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AC016700.2-201ENST00000446011 156 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH11P55287 RPL23AP75-201ENST00000491601 451 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AC015911.1-201ENST00000495111 156 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AC021231.3-201ENST00000558497 370 ntBASIC2.22□□□□□ -2.05
CDH11P55287 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH11P55287 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH11P55287 AC010928.2-201ENST00000588017 287 ntBASIC2.22□□□□□ -2.05
CDH11P55287 Z98751.3-201ENST00000604447 521 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AL034555.1-201ENST00000604816 211 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AC005520.5-201ENST00000613926 164 ntBASIC2.22□□□□□ -2.05
CDH11P55287 HMGB1P24-202ENST00000615653 685 ntBASIC2.22□□□□□ -2.05
CDH11P55287 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH11P55287 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CDH11P55287 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDH11P55287 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.21□□□□□ -2.05
CDH11P55287 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH11P55287 Y_RNA.259-201ENST00000364619 101 ntBASIC2.21□□□□□ -2.06
CDH11P55287 RNU6-968P-201ENST00000384076 107 ntBASIC2.21□□□□□ -2.06
CDH11P55287 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
CDH11P55287 SNORA75.6-201ENST00000391318 127 ntBASIC2.21□□□□□ -2.06
CDH11P55287 MTCYBP2-201ENST00000407745 171 ntBASIC2.21□□□□□ -2.06
CDH11P55287 AC007064.1-201ENST00000412238 351 ntBASIC2.21□□□□□ -2.06
CDH11P55287 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH11P55287 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH11P55287 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH11P55287 AC140059.1-201ENST00000489238 361 ntBASIC2.21□□□□□ -2.06
CDH11P55287 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH11P55287 AC021146.2-201ENST00000504736 556 ntBASIC2.21□□□□□ -2.06
CDH11P55287 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
CDH11P55287 Y_RNA.675-201ENST00000516389 149 ntBASIC2.21□□□□□ -2.06
CDH11P55287 SCARNA16.2-201ENST00000516520 172 ntBASIC2.21□□□□□ -2.06
CDH11P55287 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.21□□□□□ -2.06
CDH11P55287 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH11P55287 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH11P55287 AC007375.1-201ENST00000554513 578 ntBASIC2.21□□□□□ -2.06
CDH11P55287 MIR4273-201ENST00000582824 84 ntBASIC2.21□□□□□ -2.06
CDH11P55287 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH11P55287 AL050343.2-201ENST00000607338 280 ntBASIC2.21□□□□□ -2.06
CDH11P55287 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.21□□□□□ -2.06
CDH11P55287 PISRT1.1-201ENST00000616930 107 ntBASIC2.21□□□□□ -2.06
CDH11P55287 SCARNA4-201ENST00000629045 128 ntBASIC2.21□□□□□ -2.06
CDH11P55287 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDH11P55287 Z82209.1-201ENST00000422141 2135 ntBASIC2.21□□□□□ -2.06
CDH11P55287 ZNF299P-201ENST00000406845 1804 ntBASIC2.21□□□□□ -2.06
CDH11P55287 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH11P55287 AC006026.1-201ENST00000444025 1803 ntBASIC2.2□□□□□ -2.06
CDH11P55287 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.2□□□□□ -2.06
CDH11P55287 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDH11P55287 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.2□□□□□ -2.06
CDH11P55287 Y_RNA.2-201ENST00000362330 96 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms