Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-456P-201ENST00000384493 107 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AC139712.2-201ENST00000424302 339 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AC133104.1-201ENST00000429100 218 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
ACLYP53396 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
ACLYP53396 GMFBP1-201ENST00000467831 427 ntBASIC1.38□□□□□ -2.19
ACLYP53396 FO393415.2-201ENST00000480085 343 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 MTCO3P28-201ENST00000513351 515 ntBASIC1.38□□□□□ -2.19
ACLYP53396 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
ACLYP53396 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.38□□□□□ -2.19
ACLYP53396 AC109446.2-201ENST00000567872 497 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AC078795.3-201ENST00000602913 472 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AC002044.1-201ENST00000606707 158 ntBASIC1.38□□□□□ -2.19
ACLYP53396 MIR6515-201ENST00000619843 57 ntBASIC1.38□□□□□ -2.19
ACLYP53396 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.38□□□□□ -2.19
ACLYP53396 AC245060.5-201ENST00000610778 3293 ntBASIC1.38□□□□□ -2.19
ACLYP53396 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ACLYP53396 MTND4P14-201ENST00000435799 1354 ntBASIC1.37□□□□□ -2.19
ACLYP53396 U3.9-201ENST00000363823 204 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RNU6-266P-201ENST00000364225 107 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RNU6-282P-201ENST00000365357 103 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RNU6-438P-201ENST00000365561 103 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RNU6-248P-201ENST00000410720 107 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RPL21P111-201ENST00000418453 477 ntBASIC1.37□□□□□ -2.19
ACLYP53396 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.37□□□□□ -2.19
ACLYP53396 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
ACLYP53396 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.37□□□□□ -2.19
ACLYP53396 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.37□□□□□ -2.19
ACLYP53396 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.37□□□□□ -2.19
ACLYP53396 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ACLYP53396 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RPL31P3-201ENST00000458430 332 ntBASIC1.37□□□□□ -2.19
ACLYP53396 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.37□□□□□ -2.19
ACLYP53396 AC093852.1-201ENST00000503587 266 ntBASIC1.37□□□□□ -2.19
ACLYP53396 AC016632.1-201ENST00000503994 196 ntBASIC1.37□□□□□ -2.19
ACLYP53396 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.37□□□□□ -2.19
ACLYP53396 AK3P2-201ENST00000507976 429 ntBASIC1.37□□□□□ -2.19
ACLYP53396 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.37□□□□□ -2.19
ACLYP53396 SUMO2P18-201ENST00000518873 252 ntBASIC1.37□□□□□ -2.19
ACLYP53396 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
ACLYP53396 MTCO3P23-201ENST00000561363 289 ntBASIC1.37□□□□□ -2.19
ACLYP53396 RSL24D1P11-201ENST00000591045 491 ntBASIC1.37□□□□□ -2.19
ACLYP53396 PCGEM1.1-201ENST00000613431 131 ntBASIC1.37□□□□□ -2.19
ACLYP53396 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ACLYP53396 AL391262.2-201ENST00000622466 494 ntBASIC1.37□□□□□ -2.19
ACLYP53396 MIR6767-201ENST00000637302 66 ntBASIC1.37□□□□□ -2.19
ACLYP53396 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.37□□□□□ -2.19
ACLYP53396 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ACLYP53396 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ACLYP53396 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU6-552P-201ENST00000362869 119 ntBASIC1.36□□□□□ -2.19
ACLYP53396 Y_RNA.67-201ENST00000362870 100 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU4-91P-201ENST00000364778 135 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU6-827P-201ENST00000365553 106 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU6-296P-201ENST00000384608 107 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
ACLYP53396 UBE2V1P8-201ENST00000437166 265 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RPS27AP8-201ENST00000452665 445 ntBASIC1.36□□□□□ -2.19
ACLYP53396 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
ACLYP53396 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.36□□□□□ -2.19
ACLYP53396 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.36□□□□□ -2.19
ACLYP53396 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.36□□□□□ -2.19
ACLYP53396 AP002963.1-201ENST00000530590 184 ntBASIC1.36□□□□□ -2.19
ACLYP53396 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.36□□□□□ -2.19
ACLYP53396 AP003034.1-201ENST00000534621 422 ntBASIC1.36□□□□□ -2.19
ACLYP53396 AC103996.1-201ENST00000555468 102 ntBASIC1.36□□□□□ -2.19
ACLYP53396 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.36□□□□□ -2.19
ACLYP53396 AGGF1P4-201ENST00000568249 801 ntBASIC1.36□□□□□ -2.19
ACLYP53396 MIR4422-201ENST00000581938 83 ntBASIC1.36□□□□□ -2.19
ACLYP53396 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.36□□□□□ -2.19
ACLYP53396 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.36□□□□□ -2.19
ACLYP53396 RNU6-606P-201ENST00000384721 111 ntBASIC1.35□□□□□ -2.19
ACLYP53396 RNY3P10-201ENST00000384764 102 ntBASIC1.35□□□□□ -2.19
ACLYP53396 MT-TH-201ENST00000387441 69 ntBASIC1.35□□□□□ -2.19
ACLYP53396 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
ACLYP53396 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.35□□□□□ -2.19
ACLYP53396 MIR1267-201ENST00000408723 78 ntBASIC1.35□□□□□ -2.19
ACLYP53396 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.35□□□□□ -2.19
ACLYP53396 BX295541.1-201ENST00000417774 250 ntBASIC1.35□□□□□ -2.19
ACLYP53396 AL133217.1-201ENST00000450980 425 ntBASIC1.35□□□□□ -2.19
ACLYP53396 SCARNA18-201ENST00000459004 134 ntBASIC1.35□□□□□ -2.19
ACLYP53396 HMGN1P13-201ENST00000505795 138 ntBASIC1.35□□□□□ -2.19
ACLYP53396 RNU6-567P-201ENST00000516746 107 ntBASIC1.35□□□□□ -2.19
ACLYP53396 SNORD60.2-201ENST00000516883 86 ntBASIC1.35□□□□□ -2.19
ACLYP53396 RNU6-1223P-201ENST00000517124 104 ntBASIC1.35□□□□□ -2.19
ACLYP53396 AC060788.1-201ENST00000521318 469 ntBASIC1.35□□□□□ -2.19
ACLYP53396 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.35□□□□□ -2.19
ACLYP53396 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.35□□□□□ -2.19
ACLYP53396 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.35□□□□□ -2.19
ACLYP53396 Z98751.3-201ENST00000604447 521 ntBASIC1.35□□□□□ -2.19
ACLYP53396 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ACLYP53396 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms