Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MIR216A-201ENST00000385063 110 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 SNORA40.2-201ENST00000390847 128 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 SNORA16.2-201ENST00000390991 127 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 RNU4-22P-201ENST00000411058 166 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 ELOCP17-201ENST00000414751 326 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 RPL22P18-201ENST00000417197 377 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 AC244098.3-201ENST00000424803 96 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 MTND5P2-201ENST00000442927 1142 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 AC105313.1-201ENST00000509121 353 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 AC109445.1-201ENST00000512356 383 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 RNU6-751P-201ENST00000516382 101 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 MTND2P7-201ENST00000521337 640 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 PCGEM1.1-201ENST00000613431 131 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 AL138726.1-201ENST00000614873 333 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 AP002782.1-201ENST00000623107 614 ntBASIC0.07□□□□□ -2.4
POLR2JP52435 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.07□□□□□ -2.4
POLR2JP52435 RNU6-621P-201ENST00000364752 109 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
POLR2JP52435 RNU1-139P-201ENST00000391307 165 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AL355796.1-201ENST00000406706 323 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AL590135.1-201ENST00000422215 156 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC019205.3-201ENST00000424573 156 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AL117351.1-201ENST00000438864 766 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC243964.1-201ENST00000441814 261 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC016700.2-201ENST00000446011 156 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.06□□□□□ -2.4
POLR2JP52435 AL360271.2-201ENST00000447710 161 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 U7.7-201ENST00000459276 60 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 SRRM1P2-201ENST00000464531 1192 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.06□□□□□ -2.4
POLR2JP52435 AC015911.1-201ENST00000495111 156 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 HMGB1P29-201ENST00000505659 499 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.06□□□□□ -2.4
POLR2JP52435 RNU6-334P-201ENST00000517072 102 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AP002453.2-201ENST00000533503 320 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC016957.1-201ENST00000534895 309 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.06□□□□□ -2.4
POLR2JP52435 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.06□□□□□ -2.4
POLR2JP52435 AC025627.3-201ENST00000582078 182 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.06□□□□□ -2.4
POLR2JP52435 AC112191.3-201ENST00000604371 277 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.06□□□□□ -2.4
POLR2JP52435 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.06□□□□□ -2.4
POLR2JP52435 FRG1KP-201ENST00000623592 341 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC100810.6-201ENST00000638068 285 ntBASIC0.06□□□□□ -2.4
POLR2JP52435 AC092268.1-201ENST00000342691 405 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 Y_RNA.132-201ENST00000363421 102 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 RNU6-527P-201ENST00000363425 104 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 U3.9-201ENST00000363823 204 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 Y_RNA.192-201ENST00000363977 102 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 SNORD89-201ENST00000390981 114 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 TIMM9P3-201ENST00000428659 274 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 RSL24D1P8-201ENST00000434442 492 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 HMGN2P34-201ENST00000437647 269 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 NFU1P2-201ENST00000448700 469 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 AL133217.1-201ENST00000450980 425 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 AC021146.8-201ENST00000507455 733 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 AK3P2-201ENST00000507976 429 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 AC007834.2-201ENST00000536310 343 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 BCRP9-201ENST00000605312 388 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.05□□□□□ -2.4
POLR2JP52435 MIR924-201ENST00000638017 53 ntBASIC0.05□□□□□ -2.4
POLR2JP52435 snoU2-30.2-201ENST00000362805 70 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 RNU5E-7P-201ENST00000365290 117 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 RNU4-48P-201ENST00000365559 182 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 RNU6-43P-201ENST00000384302 107 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 RNU6-1026P-201ENST00000384465 108 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 RNA5SP511-201ENST00000410487 115 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.04□□□□□ -2.4
POLR2JP52435 AC002486.1-201ENST00000435098 391 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 snoU13.25-201ENST00000458945 104 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.04□□□□□ -2.4
POLR2JP52435 AL356157.2-201ENST00000605122 111 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 AL359547.2-201ENST00000615810 418 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 AL513423.1-201ENST00000621695 132 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 U4.7-201ENST00000638126 106 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 AC006927.2-201ENST00000639256 389 ntBASIC0.04□□□□□ -2.4
POLR2JP52435 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
POLR2JP52435 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
POLR2JP52435 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-545P-201ENST00000362681 104 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-37P-201ENST00000362692 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-105P-201ENST00000363909 104 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-11P-201ENST00000364234 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU4-76P-201ENST00000364509 141 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-1-201ENST00000383898 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-42P-201ENST00000384165 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-36P-201ENST00000384172 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-4P-201ENST00000384205 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-5P-201ENST00000384238 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-3P-201ENST00000384314 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-378P-201ENST00000384324 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-163P-201ENST00000384396 106 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-2-201ENST00000384627 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-9-201ENST00000384776 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 RNU6-33P-201ENST00000384793 107 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 USP9YP11-201ENST00000427537 717 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC010975.2-201ENST00000427781 588 ntBASIC0.03□□□□□ -2.4
POLR2JP52435 AC244670.1-201ENST00000436879 112 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms