Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.78□□□□□ -1.96
NEK3P51956 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.78□□□□□ -1.96
NEK3P51956 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.78□□□□□ -1.96
NEK3P51956 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.78□□□□□ -1.96
NEK3P51956 RNU7-175P-201ENST00000515915 61 ntBASIC2.78□□□□□ -1.96
NEK3P51956 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.78□□□□□ -1.96
NEK3P51956 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.78□□□□□ -1.96
NEK3P51956 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.78□□□□□ -1.96
NEK3P51956 AC104581.2-201ENST00000572227 430 ntBASIC2.78□□□□□ -1.96
NEK3P51956 MIR4446-201ENST00000578505 67 ntBASIC2.78□□□□□ -1.96
NEK3P51956 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
NEK3P51956 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.78□□□□□ -1.96
NEK3P51956 AC009229.3-201ENST00000608056 282 ntBASIC2.78□□□□□ -1.96
NEK3P51956 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.78□□□□□ -1.96
NEK3P51956 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
NEK3P51956 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
NEK3P51956 Y_RNA.2-201ENST00000362330 96 ntBASIC2.77□□□□□ -1.97
NEK3P51956 RNU1-91P-201ENST00000364746 163 ntBASIC2.77□□□□□ -1.97
NEK3P51956 Y_RNA.384-201ENST00000383909 102 ntBASIC2.77□□□□□ -1.97
NEK3P51956 Y_RNA.533-201ENST00000384596 114 ntBASIC2.77□□□□□ -1.97
NEK3P51956 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
NEK3P51956 SNORA75.4-201ENST00000391278 119 ntBASIC2.77□□□□□ -1.97
NEK3P51956 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.77□□□□□ -1.97
NEK3P51956 SNORD109B-201ENST00000458961 67 ntBASIC2.77□□□□□ -1.97
NEK3P51956 SNORD109A-201ENST00000459128 67 ntBASIC2.77□□□□□ -1.97
NEK3P51956 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.77□□□□□ -1.97
NEK3P51956 AC090517.1-201ENST00000569307 266 ntBASIC2.77□□□□□ -1.97
NEK3P51956 MIR3162-201ENST00000581818 82 ntBASIC2.77□□□□□ -1.97
NEK3P51956 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.77□□□□□ -1.97
NEK3P51956 SNRPGP20-201ENST00000604477 205 ntBASIC2.77□□□□□ -1.97
NEK3P51956 AL132765.2-201ENST00000610812 351 ntBASIC2.77□□□□□ -1.97
NEK3P51956 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.77□□□□□ -1.97
NEK3P51956 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.77□□□□□ -1.97
NEK3P51956 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.77□□□□□ -1.97
NEK3P51956 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.77□□□□□ -1.97
NEK3P51956 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
NEK3P51956 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NEK3P51956 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEK3P51956 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEK3P51956 RNU6-859P-201ENST00000362728 107 ntBASIC2.76□□□□□ -1.97
NEK3P51956 RNU1-76P-201ENST00000362903 159 ntBASIC2.76□□□□□ -1.97
NEK3P51956 RNU5F-3P-201ENST00000363767 117 ntBASIC2.76□□□□□ -1.97
NEK3P51956 U8.10-201ENST00000384260 133 ntBASIC2.76□□□□□ -1.97
NEK3P51956 SNORA41-201ENST00000384675 132 ntBASIC2.76□□□□□ -1.97
NEK3P51956 MT-TD-201ENST00000387419 68 ntBASIC2.76□□□□□ -1.97
NEK3P51956 RN7SKP284-201ENST00000411002 343 ntBASIC2.76□□□□□ -1.97
NEK3P51956 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK3P51956 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK3P51956 AL137159.1-201ENST00000452808 512 ntBASIC2.76□□□□□ -1.97
NEK3P51956 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK3P51956 MIR4513-201ENST00000581077 86 ntBASIC2.76□□□□□ -1.97
NEK3P51956 MIR3670-2-201ENST00000582974 65 ntBASIC2.76□□□□□ -1.97
NEK3P51956 MIR4672-201ENST00000583126 81 ntBASIC2.76□□□□□ -1.97
NEK3P51956 MIR3670-1-201ENST00000584160 65 ntBASIC2.76□□□□□ -1.97
NEK3P51956 MIR3670-3-201ENST00000584855 65 ntBASIC2.76□□□□□ -1.97
NEK3P51956 AL158827.2-201ENST00000602494 330 ntBASIC2.76□□□□□ -1.97
NEK3P51956 MIR3670-4-201ENST00000612260 65 ntBASIC2.76□□□□□ -1.97
NEK3P51956 AC133104.2-201ENST00000615272 193 ntBASIC2.76□□□□□ -1.97
NEK3P51956 AC245884.12-201ENST00000615364 59 ntBASIC2.76□□□□□ -1.97
NEK3P51956 AL691447.3-201ENST00000635020 330 ntBASIC2.76□□□□□ -1.97
NEK3P51956 BX322639.1-202ENST00000423987 2213 ntBASIC2.76□□□□□ -1.97
NEK3P51956 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
NEK3P51956 RNU1-112P-201ENST00000364401 164 ntBASIC2.75□□□□□ -1.97
NEK3P51956 RNU6-1297P-201ENST00000384415 104 ntBASIC2.75□□□□□ -1.97
NEK3P51956 MTCYBP4-201ENST00000401524 249 ntBASIC2.75□□□□□ -1.97
NEK3P51956 AL356057.3-201ENST00000402607 340 ntBASIC2.75□□□□□ -1.97
NEK3P51956 AC011816.1-201ENST00000441346 546 ntBASIC2.75□□□□□ -1.97
NEK3P51956 AL109933.2-201ENST00000452651 260 ntBASIC2.75□□□□□ -1.97
NEK3P51956 MTND4P17-201ENST00000470444 350 ntBASIC2.75□□□□□ -1.97
NEK3P51956 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.75□□□□□ -1.97
NEK3P51956 ANXA2P1-201ENST00000505539 926 ntBASIC2.75□□□□□ -1.97
NEK3P51956 SNORA4.4-201ENST00000515921 135 ntBASIC2.75□□□□□ -1.97
NEK3P51956 RNU6-965P-201ENST00000516721 96 ntBASIC2.75□□□□□ -1.97
NEK3P51956 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.75□□□□□ -1.97
NEK3P51956 AC010928.2-201ENST00000588017 287 ntBASIC2.75□□□□□ -1.97
NEK3P51956 LARP7P1-201ENST00000605576 316 ntBASIC2.75□□□□□ -1.97
NEK3P51956 SNORD14A-201ENST00000606526 91 ntBASIC2.75□□□□□ -1.97
NEK3P51956 AC005562.2-201ENST00000618264 111 ntBASIC2.75□□□□□ -1.97
NEK3P51956 RNU6-1188P-201ENST00000363795 107 ntBASIC2.74□□□□□ -1.97
NEK3P51956 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
NEK3P51956 RNU6-245P-201ENST00000384020 107 ntBASIC2.74□□□□□ -1.97
NEK3P51956 RNU6-17P-201ENST00000384245 107 ntBASIC2.74□□□□□ -1.97
NEK3P51956 RNU6-18P-201ENST00000384527 107 ntBASIC2.74□□□□□ -1.97
NEK3P51956 MIR32-201ENST00000384965 70 ntBASIC2.74□□□□□ -1.97
NEK3P51956 MIR29C-201ENST00000385231 88 ntBASIC2.74□□□□□ -1.97
NEK3P51956 RNU6-370P-201ENST00000411008 104 ntBASIC2.74□□□□□ -1.97
NEK3P51956 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.74□□□□□ -1.97
NEK3P51956 AL035666.1-201ENST00000446195 348 ntBASIC2.74□□□□□ -1.97
NEK3P51956 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.74□□□□□ -1.97
NEK3P51956 RPS23P5-201ENST00000495419 428 ntBASIC2.74□□□□□ -1.97
NEK3P51956 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
NEK3P51956 RNU6-559P-201ENST00000516151 98 ntBASIC2.74□□□□□ -1.97
NEK3P51956 RNU6-277P-201ENST00000516272 106 ntBASIC2.74□□□□□ -1.97
NEK3P51956 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK3P51956 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK3P51956 CBX3P8-201ENST00000532412 525 ntBASIC2.74□□□□□ -1.97
NEK3P51956 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
NEK3P51956 MIR5701-3-201ENST00000578890 82 ntBASIC2.74□□□□□ -1.97
NEK3P51956 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK3P51956 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms