Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MECP2P51608 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
MECP2P51608 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
MECP2P51608 SNORA68.1-201ENST00000364537 132 ntBASIC3.14□□□□□ -1.91
MECP2P51608 Y_RNA.331-201ENST00000365267 102 ntBASIC3.14□□□□□ -1.91
MECP2P51608 Y_RNA.352-201ENST00000365439 102 ntBASIC3.14□□□□□ -1.91
MECP2P51608 RNU1-13P-201ENST00000384499 162 ntBASIC3.14□□□□□ -1.91
MECP2P51608 Y_RNA.515-201ENST00000384535 112 ntBASIC3.14□□□□□ -1.91
MECP2P51608 U8.12-201ENST00000384701 133 ntBASIC3.14□□□□□ -1.91
MECP2P51608 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MECP2P51608 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.14□□□□□ -1.91
MECP2P51608 RAB28P5-201ENST00000427490 651 ntBASIC3.14□□□□□ -1.91
MECP2P51608 RPL30P4-201ENST00000429309 333 ntBASIC3.14□□□□□ -1.91
MECP2P51608 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.14□□□□□ -1.91
MECP2P51608 RNU5F-4P-201ENST00000516581 114 ntBASIC3.14□□□□□ -1.91
MECP2P51608 SCARNA24.2-201ENST00000516968 130 ntBASIC3.14□□□□□ -1.91
MECP2P51608 RNU1-117P-201ENST00000517041 158 ntBASIC3.14□□□□□ -1.91
MECP2P51608 AC008011.1-201ENST00000545989 227 ntBASIC3.14□□□□□ -1.91
MECP2P51608 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.14□□□□□ -1.91
MECP2P51608 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.14□□□□□ -1.91
MECP2P51608 AC068205.3-201ENST00000636385 468 ntBASIC3.14□□□□□ -1.91
MECP2P51608 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.14□□□□□ -1.91
MECP2P51608 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
MECP2P51608 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.14□□□□□ -1.91
MECP2P51608 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
MECP2P51608 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
MECP2P51608 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MECP2P51608 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.14□□□□□ -1.91
MECP2P51608 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.14□□□□□ -1.91
MECP2P51608 Y_RNA.257-201ENST00000364596 102 ntBASIC3.13□□□□□ -1.91
MECP2P51608 RNA5SP97-201ENST00000365006 84 ntBASIC3.13□□□□□ -1.91
MECP2P51608 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.13□□□□□ -1.91
MECP2P51608 Y_RNA.415-201ENST00000384012 112 ntBASIC3.13□□□□□ -1.91
MECP2P51608 Y_RNA.416-201ENST00000384014 113 ntBASIC3.13□□□□□ -1.91
MECP2P51608 RNU6-514P-201ENST00000384208 107 ntBASIC3.13□□□□□ -1.91
MECP2P51608 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.13□□□□□ -1.91
MECP2P51608 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.13□□□□□ -1.91
MECP2P51608 YME1L1P1-201ENST00000429435 297 ntBASIC3.13□□□□□ -1.91
MECP2P51608 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.13□□□□□ -1.91
MECP2P51608 AC005042.3-201ENST00000453230 174 ntBASIC3.13□□□□□ -1.91
MECP2P51608 RBMY2UP-201ENST00000453474 324 ntBASIC3.13□□□□□ -1.91
MECP2P51608 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
MECP2P51608 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.13□□□□□ -1.91
MECP2P51608 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.13□□□□□ -1.91
MECP2P51608 RNA5SP179-201ENST00000517284 121 ntBASIC3.13□□□□□ -1.91
MECP2P51608 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.13□□□□□ -1.91
MECP2P51608 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.13□□□□□ -1.91
MECP2P51608 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.13□□□□□ -1.91
MECP2P51608 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.13□□□□□ -1.91
MECP2P51608 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
MECP2P51608 AC006380.1-201ENST00000603598 186 ntBASIC3.13□□□□□ -1.91
MECP2P51608 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
MECP2P51608 MIR3674-201ENST00000636576 68 ntBASIC3.13□□□□□ -1.91
MECP2P51608 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
MECP2P51608 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
MECP2P51608 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
MECP2P51608 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
MECP2P51608 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MECP2P51608 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.12□□□□□ -1.91
MECP2P51608 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
MECP2P51608 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
MECP2P51608 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MECP2P51608 Y_RNA.16-201ENST00000362421 102 ntBASIC3.12□□□□□ -1.91
MECP2P51608 Y_RNA.60-201ENST00000362831 98 ntBASIC3.12□□□□□ -1.91
MECP2P51608 SNORD32B-201ENST00000364460 84 ntBASIC3.12□□□□□ -1.91
MECP2P51608 RNU6-1264P-201ENST00000383891 107 ntBASIC3.12□□□□□ -1.91
MECP2P51608 RNU6-102P-201ENST00000384485 104 ntBASIC3.12□□□□□ -1.91
MECP2P51608 Y_RNA.569-201ENST00000384749 103 ntBASIC3.12□□□□□ -1.91
MECP2P51608 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MECP2P51608 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.12□□□□□ -1.91
MECP2P51608 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.12□□□□□ -1.91
MECP2P51608 POLR2KP2-201ENST00000438155 177 ntBASIC3.12□□□□□ -1.91
MECP2P51608 HSPE1P25-201ENST00000455484 251 ntBASIC3.12□□□□□ -1.91
MECP2P51608 CYP2C59P-201ENST00000457790 269 ntBASIC3.12□□□□□ -1.91
MECP2P51608 RN7SL601P-201ENST00000471221 293 ntBASIC3.12□□□□□ -1.91
MECP2P51608 AC083906.5-201ENST00000503722 328 ntBASIC3.12□□□□□ -1.91
MECP2P51608 SERF1AP1-201ENST00000514575 187 ntBASIC3.12□□□□□ -1.91
MECP2P51608 Y_RNA.673-201ENST00000516306 88 ntBASIC3.12□□□□□ -1.91
MECP2P51608 RNU2-31P-201ENST00000516954 155 ntBASIC3.12□□□□□ -1.91
MECP2P51608 MIR2116-201ENST00000517221 80 ntBASIC3.12□□□□□ -1.91
MECP2P51608 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
MECP2P51608 AC091167.4-201ENST00000605079 184 ntBASIC3.12□□□□□ -1.91
MECP2P51608 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
MECP2P51608 ZYXP1-201ENST00000617638 118 ntBASIC3.12□□□□□ -1.91
MECP2P51608 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
MECP2P51608 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MECP2P51608 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MECP2P51608 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
MECP2P51608 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.11□□□□□ -1.91
MECP2P51608 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.11□□□□□ -1.91
MECP2P51608 Y_RNA.54-201ENST00000362766 105 ntBASIC3.11□□□□□ -1.91
MECP2P51608 SNORD27-201ENST00000363981 72 ntBASIC3.11□□□□□ -1.91
MECP2P51608 RNA5SP130-201ENST00000364431 114 ntBASIC3.11□□□□□ -1.91
MECP2P51608 RNU6-326P-201ENST00000365480 107 ntBASIC3.11□□□□□ -1.91
MECP2P51608 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MECP2P51608 RNU6-1026P-201ENST00000384465 108 ntBASIC3.11□□□□□ -1.91
MECP2P51608 RNA5SP424-201ENST00000390988 115 ntBASIC3.11□□□□□ -1.91
MECP2P51608 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.11□□□□□ -1.91
MECP2P51608 ELOCP21-201ENST00000412558 336 ntBASIC3.11□□□□□ -1.91
MECP2P51608 AC093578.1-201ENST00000415219 368 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms