Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 RNU5F-6P-201ENST00000362979 116 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RNU6-169P-201ENST00000365336 107 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RNY1P14-201ENST00000384426 108 ntBASIC0.76□□□□□ -2.29
CDK9P50750 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CDK9P50750 RNU6-293P-201ENST00000411259 106 ntBASIC0.76□□□□□ -2.29
CDK9P50750 POLR2J4-204ENST00000418424 324 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL590135.1-201ENST00000422215 156 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC019205.3-201ENST00000424573 156 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL365184.2-201ENST00000431139 435 ntBASIC0.76□□□□□ -2.29
CDK9P50750 MTCO3P29-201ENST00000432119 779 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC016700.2-201ENST00000446011 156 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RPS4XP11-201ENST00000446897 772 ntBASIC0.76□□□□□ -2.29
CDK9P50750 SNRPFP3-201ENST00000457792 225 ntBASIC0.76□□□□□ -2.29
CDK9P50750 MTCO2P6-201ENST00000463134 685 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RAP1BP2-201ENST00000478270 544 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC015911.1-201ENST00000495111 156 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.76□□□□□ -2.29
CDK9P50750 LRRC34P2-201ENST00000514850 553 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RN7SKP88-201ENST00000516847 250 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RNU6-165P-201ENST00000517170 99 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC090572.1-201ENST00000519251 160 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL137100.2-201ENST00000555786 315 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.76□□□□□ -2.29
CDK9P50750 MTCO3P23-201ENST00000561363 289 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.76□□□□□ -2.29
CDK9P50750 PCMTD1P2-201ENST00000565017 355 ntBASIC0.76□□□□□ -2.29
CDK9P50750 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
CDK9P50750 SNORA4-201ENST00000584302 138 ntBASIC0.76□□□□□ -2.29
CDK9P50750 HMGN1P30-201ENST00000589286 268 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC008751.2-201ENST00000597885 980 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL590229.1-201ENST00000603497 542 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL078603.1-201ENST00000603824 313 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL158050.2-201ENST00000605336 568 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AC105129.3-201ENST00000605455 485 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL121992.2-201ENST00000606262 256 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL022345.2-201ENST00000606307 135 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL365434.2-201ENST00000607979 234 ntBASIC0.76□□□□□ -2.29
CDK9P50750 AL021879.1-201ENST00000611756 288 ntBASIC0.76□□□□□ -2.29
CDK9P50750 7SK.8-201ENST00000612110 250 ntBASIC0.76□□□□□ -2.29
CDK9P50750 7SK.11-201ENST00000615477 250 ntBASIC0.76□□□□□ -2.29
CDK9P50750 7SK.13-201ENST00000622040 250 ntBASIC0.76□□□□□ -2.29
CDK9P50750 RNU6-179P-201ENST00000363350 107 ntBASIC0.75□□□□□ -2.29
CDK9P50750 RNU6-501P-201ENST00000364072 100 ntBASIC0.75□□□□□ -2.29
CDK9P50750 MIR548J-201ENST00000408833 112 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC060773.1-201ENST00000421698 310 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC119618.1-201ENST00000434191 222 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.75□□□□□ -2.29
CDK9P50750 NDUFA5P4-201ENST00000436704 385 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AL512286.1-201ENST00000439244 400 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC116562.3-201ENST00000506136 177 ntBASIC0.75□□□□□ -2.29
CDK9P50750 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.75□□□□□ -2.29
CDK9P50750 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.75□□□□□ -2.29
CDK9P50750 RNU6-377P-201ENST00000515965 102 ntBASIC0.75□□□□□ -2.29
CDK9P50750 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
CDK9P50750 SCARNA24.1-201ENST00000516465 137 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.75□□□□□ -2.29
CDK9P50750 AC068587.5-201ENST00000528506 175 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.75□□□□□ -2.29
CDK9P50750 AC011604.1-201ENST00000545978 196 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC109446.1-201ENST00000566172 220 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC078795.3-201ENST00000602913 472 ntBASIC0.75□□□□□ -2.29
CDK9P50750 AC009159.2-201ENST00000617603 606 ntBASIC0.75□□□□□ -2.29
CDK9P50750 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDK9P50750 Y_RNA.122-201ENST00000363331 96 ntBASIC0.74□□□□□ -2.29
CDK9P50750 RNU1-96P-201ENST00000364163 162 ntBASIC0.74□□□□□ -2.29
CDK9P50750 RNU1-36P-201ENST00000365130 165 ntBASIC0.74□□□□□ -2.29
CDK9P50750 RNU6-438P-201ENST00000365561 103 ntBASIC0.74□□□□□ -2.29
CDK9P50750 RNU6-378P-201ENST00000384324 107 ntBASIC0.74□□□□□ -2.29
CDK9P50750 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CDK9P50750 RNU6-1245P-201ENST00000411130 106 ntBASIC0.74□□□□□ -2.29
CDK9P50750 PIGFP2-201ENST00000421400 651 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.74□□□□□ -2.29
CDK9P50750 USP9YP14-201ENST00000430663 563 ntBASIC0.74□□□□□ -2.29
CDK9P50750 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.74□□□□□ -2.29
CDK9P50750 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.74□□□□□ -2.29
CDK9P50750 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.74□□□□□ -2.29
CDK9P50750 RNU2-34P-201ENST00000516534 121 ntBASIC0.74□□□□□ -2.29
CDK9P50750 CYCSP23-201ENST00000519781 313 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC022878.1-201ENST00000530684 149 ntBASIC0.74□□□□□ -2.29
CDK9P50750 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDK9P50750 HSPE1P4-201ENST00000550617 308 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.74□□□□□ -2.29
CDK9P50750 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
CDK9P50750 CYP4A27P-201ENST00000567218 190 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC108706.1-201ENST00000611053 297 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC008147.4-201ENST00000617570 1204 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC009509.4-201ENST00000619202 509 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC011155.2-201ENST00000623202 216 ntBASIC0.74□□□□□ -2.29
CDK9P50750 SNORA43.4-201ENST00000629559 138 ntBASIC0.74□□□□□ -2.29
CDK9P50750 MIR338-201ENST00000636369 67 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AL445984.1-201ENST00000637834 659 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC245060.5-201ENST00000610778 3293 ntBASIC0.74□□□□□ -2.29
CDK9P50750 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
CDK9P50750 RNU6-1123P-201ENST00000362347 106 ntBASIC0.73□□□□□ -2.29
CDK9P50750 Y_RNA.269-201ENST00000364685 89 ntBASIC0.73□□□□□ -2.29
CDK9P50750 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
CDK9P50750 RNU6-641P-201ENST00000384006 107 ntBASIC0.73□□□□□ -2.29
CDK9P50750 Y_RNA.508-201ENST00000384502 114 ntBASIC0.73□□□□□ -2.29
CDK9P50750 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
CDK9P50750 RNU6-550P-201ENST00000391057 101 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms