Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR559-201ENST00000385188 96 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AL590135.1-201ENST00000422215 156 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AL358453.1-201ENST00000422522 250 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC012306.1-201ENST00000423267 114 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC019205.3-201ENST00000424573 156 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC009238.1-201ENST00000442165 424 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AL137792.2-201ENST00000443484 235 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC016700.2-201ENST00000446011 156 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC009237.6-201ENST00000446969 424 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.14□□□□□ -2.07
NKX2-1P43699 AC068781.1-201ENST00000488231 618 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC015911.1-201ENST00000495111 156 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC093303.1-201ENST00000514549 295 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 RNA5SP341-201ENST00000516261 117 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 RNU6-1198P-201ENST00000516904 67 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 CYP4A27P-201ENST00000567218 190 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 MIR3923-201ENST00000579521 83 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.14□□□□□ -2.07
NKX2-1P43699 AL078605.1-201ENST00000603529 500 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 RPL17P51-201ENST00000605218 238 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 AC134503.1-201ENST00000633048 54 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
NKX2-1P43699 AC233981.2-201ENST00000611524 1614 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NKX2-1P43699 RNY1P16-201ENST00000363063 111 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 Y_RNA.128-201ENST00000363391 112 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU1-115P-201ENST00000365329 160 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU6-968P-201ENST00000384076 107 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU6-890P-201ENST00000384121 107 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU6-17P-201ENST00000384245 107 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU6-18P-201ENST00000384527 107 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 Y_RNA.533-201ENST00000384596 114 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU6-331P-201ENST00000384724 107 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 Y_RNA.579-201ENST00000390939 94 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 AC007064.1-201ENST00000412238 351 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 MTCYBP10-201ENST00000424905 650 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX2-1P43699 GPM6BP3-201ENST00000442797 145 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 OR2AQ1P-201ENST00000451972 200 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX2-1P43699 snoU13.30-201ENST00000458951 104 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 SCARNA16.2-201ENST00000516520 172 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNA5SP367-201ENST00000516557 118 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 RNU1-104P-201ENST00000517280 175 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 AL590705.4-201ENST00000532209 134 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 CBX3P7-201ENST00000532876 502 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX2-1P43699 MIR4658-201ENST00000584344 65 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 AC090517.3-201ENST00000625170 141 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX2-1P43699 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX2-1P43699 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX2-1P43699 FO624990.1-201ENST00000636373 85 ntBASIC2.13□□□□□ -2.07
NKX2-1P43699 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
NKX2-1P43699 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-1P43699 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-1P43699 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.12□□□□□ -2.07
NKX2-1P43699 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-1P43699 RNU4-15P-201ENST00000362613 141 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 SNORA67.1-201ENST00000364749 141 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 RNU1-138P-201ENST00000384093 164 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 Y_RNA.463-201ENST00000384271 102 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 RNU6-1274P-201ENST00000384557 107 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 SNORA12.2-201ENST00000391040 156 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AC099799.1-201ENST00000439809 192 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 RPL30P15-201ENST00000457129 321 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AC027575.1-201ENST00000481064 460 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AC132942.1-201ENST00000486753 483 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AF186996.7-201ENST00000492781 209 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.12□□□□□ -2.07
NKX2-1P43699 RNU7-175P-201ENST00000515915 61 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 RNA5SP402-201ENST00000517148 110 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 MRPS36P4-201ENST00000534436 298 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AL442663.2-201ENST00000554385 511 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX2-1P43699 7SK.7-201ENST00000603504 247 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 Z98751.3-201ENST00000604447 521 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AC093732.2-201ENST00000607950 274 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AL137847.3-201ENST00000611521 109 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX2-1P43699 uc_338.22-201ENST00000622722 187 ntBASIC2.12□□□□□ -2.07
NKX2-1P43699 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-1P43699 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NKX2-1P43699 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
NKX2-1P43699 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.11□□□□□ -2.07
NKX2-1P43699 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.11□□□□□ -2.07
NKX2-1P43699 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NKX2-1P43699 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NKX2-1P43699 Y_RNA.5-201ENST00000362334 102 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 snoU2_19.1-201ENST00000362361 80 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 RNU6-1159P-201ENST00000362933 107 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 RNA5SP387-201ENST00000364226 106 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 RNU1-52P-201ENST00000384190 164 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 U8.10-201ENST00000384260 133 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 Y_RNA.504-201ENST00000384481 104 ntBASIC2.11□□□□□ -2.07
NKX2-1P43699 EEF1A1P41-201ENST00000414667 207 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms