Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.98□□□□□ -2.25
COL18A1P39060 AC010409.1-201ENST00000487382 476 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 Vault.3-201ENST00000516676 95 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.98□□□□□ -2.25
COL18A1P39060 AC002400.1-201ENST00000569310 726 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 AC131159.1-201ENST00000621854 213 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 MTND4P4-201ENST00000439033 1366 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.98□□□□□ -2.25
COL18A1P39060 Y_RNA.22-201ENST00000362492 102 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-414P-201ENST00000363705 104 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-105P-201ENST00000363909 104 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-1141P-201ENST00000364520 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-25P-201ENST00000383873 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-48P-201ENST00000384161 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-16P-201ENST00000384385 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-15P-201ENST00000384534 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 RNU6-29P-201ENST00000384637 107 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 AC123900.1-201ENST00000420390 96 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 UBE2D3P4-201ENST00000441973 436 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 AC025465.3-201ENST00000510570 311 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 SNORA31.17-201ENST00000516953 127 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 AP003072.2-201ENST00000527756 676 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
COL18A1P39060 AC011155.2-201ENST00000623202 216 ntBASIC0.98□□□□□ -2.25
COL18A1P39060 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
COL18A1P39060 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL18A1P39060 RNU6-45P-201ENST00000384471 107 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
COL18A1P39060 AC244670.1-201ENST00000436879 112 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.97□□□□□ -2.25
COL18A1P39060 AC079781.2-201ENST00000446424 169 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 GAPDHP17-201ENST00000449858 1001 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.97□□□□□ -2.25
COL18A1P39060 RPL31P3-201ENST00000458430 332 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.97□□□□□ -2.25
COL18A1P39060 MTCO3P7-201ENST00000510008 774 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 LRRC34P2-201ENST00000514850 553 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 AC090572.1-201ENST00000519251 160 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 MIR3923-201ENST00000579521 83 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 AC008752.3-201ENST00000588113 712 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 MIR2909-201ENST00000617113 69 ntBASIC0.97□□□□□ -2.25
COL18A1P39060 SNORD32B-201ENST00000364460 84 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 VTRNA1-3-201ENST00000365645 89 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 Y_RNA.480-201ENST00000384364 102 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 MTCO3P41-201ENST00000414801 328 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.96□□□□□ -2.26
COL18A1P39060 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
COL18A1P39060 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.96□□□□□ -2.26
COL18A1P39060 AC073614.1-201ENST00000438690 650 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 MTCO1P44-201ENST00000441935 243 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC087477.1-201ENST00000465747 340 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC145146.1-201ENST00000496370 254 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 MTND2P32-201ENST00000521584 1038 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.96□□□□□ -2.26
COL18A1P39060 AC008945.2-201ENST00000606056 604 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AL590240.4-201ENST00000616908 390 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 SNORD98-201ENST00000636377 67 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
COL18A1P39060 RNU6-1235P-201ENST00000384559 107 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.96□□□□□ -2.26
COL18A1P39060 AL593851.1-201ENST00000426171 157 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC079448.1-201ENST00000449377 373 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.96□□□□□ -2.26
COL18A1P39060 RNU6-498P-201ENST00000459468 107 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.96□□□□□ -2.26
COL18A1P39060 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.96□□□□□ -2.26
COL18A1P39060 BNIP3P16-201ENST00000589779 534 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC073539.2-201ENST00000597113 165 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AL034555.1-201ENST00000604816 211 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.96□□□□□ -2.26
COL18A1P39060 AC091304.9-201ENST00000612091 226 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.96□□□□□ -2.26
COL18A1P39060 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL18A1P39060 U3.4-201ENST00000363352 213 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 RNU6-112P-201ENST00000363599 104 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 RNU6-43P-201ENST00000384302 107 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 RNU5A-2P-201ENST00000384337 116 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 SNORA12-201ENST00000391162 147 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 RPL30P13-201ENST00000418873 348 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.95□□□□□ -2.26
COL18A1P39060 AC010975.2-201ENST00000427781 588 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AC000111.3-201ENST00000433478 193 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.95□□□□□ -2.26
COL18A1P39060 RNU7-182P-201ENST00000459009 62 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AC130509.1-201ENST00000464158 433 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 RNU6-1178P-201ENST00000516674 107 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 RNU2-46P-201ENST00000517038 113 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.95□□□□□ -2.26
COL18A1P39060 AC004812.1-201ENST00000540773 146 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AC023050.3-201ENST00000541142 333 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.95□□□□□ -2.26
COL18A1P39060 RPL17P51-201ENST00000605218 238 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AL121992.2-201ENST00000606262 256 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AL451064.1-201ENST00000607718 471 ntBASIC0.95□□□□□ -2.26
COL18A1P39060 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.94□□□□□ -2.26
COL18A1P39060 RNU6-1097P-201ENST00000363586 107 ntBASIC0.94□□□□□ -2.26
COL18A1P39060 Y_RNA.274-201ENST00000364714 101 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms